Gossypium raimondii: 105763765
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Entry
105763765 CDS
T04129
Name
(RefSeq) eukaryotic translation initiation factor 4G isoform X1
KO
K03260
translation initiation factor 4G
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105763765
03012 Translation factors [BR:
gra03012
]
105763765
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105763765
mRNA cycle factors
Stress granule specific factors
105763765
Translation factors [BR:
gra03012
]
Eukaryotic type
Initiation factors
eIF-4
105763765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Motif
Other DBs
NCBI-GeneID:
105763765
NCBI-ProteinID:
XP_012437559
UniProt:
A0A0D2T481
LinkDB
All DBs
Position
12:complement(34593168..34600839)
Genome browser
AA seq
1899 aa
AA seq
DB search
MSFNQSRSDKSEQQYRKSGRSASFNQQRSSSGVYSKGAGGGPAPSRSPSSSSSLSSNRSL
KKSSNAQGGQYRLNSPAVSSTESSSTSAARTKPNGAHLQPQLLGASDASIAGNAAQPVQS
HTIQNSTRTVSNPPTSQPAAISSDTSFPSTSEKEDASKPFSLQFGSITPGFMNGMQVPAR
TSSAPPNLDEQKRNQARHDSSFKCVPNLPIPIPKQQLARKDSVATEQSSSGEVYPVPKIK
KDAQPSPVPPANQTQKPSPLNIPMTSMQMPFHHQPHVPIQYGGPNPQIQSQSVTASSMQM
PMHISLAMGNGPQVQQQVFVAGLQALPLPPQGMMHQGGGLSFTPSIGGHLPPQLGNLGMG
ITPQYSQQQGGKFGVPRKTTPVKITHPDTHEELRLDKRTDTRADGGSSVPRPHPNMPIQS
QPIPSFAPSQSINYYSNSYNTKSGFYPPPSSRPLASNQIAPNAQGPRFSYPGSQGHQNIS
FMNSAATHGSLAVNKSVHLVRGSLESANVEPVRDAQNVMPFTTSGLTQVTVKPASVSAGE
KFEDSSSSSILPSIEKAGALKPSTPASEVSSSEAQRDLDTCQESSAQQPKSGNESLTSES
LPAAAKHSGGVPVPNLDESQTSSCVSSASDSTSRESTLVLASNEGKRREGLSRSNSIKNY
QKKPGQEGQIQPPVQSTSTSNLATNPAECGVSSDGAVTEALEAKKALTSLAAVDVLSQST
RELPSINDALPSSLDPKTESKIESLNTVSSEVSGTGSKVDSFDIVQHAKIDGSSKLDERP
RSEISGINEEEKHFPEEHLSSQLVPLKSTELKSDQDSASKVVATNIVVRTPGTEQRVHNE
DLGGKVENAEATDSKDISTSRIADPTGVESSHVLMTFGSNPSSSPSNSYEMTATKTVISS
HQSAPVPTPDLLESTSNYEGEGVLLTSSKDKPAPQLSRTKSTITSGRKKLKEILQKADAA
GTTSDLYMAYKGPEEKKETVAPLASTEISSVGVNLKQASHEALQVDAIESEKITQSKAEL
DDWEDAADISAPNMETSDTDEQAHGGLASHEEDGSGNIKKKYSRDFLLKFAGQYTDLPQG
FEIASDIAAALMASNVNASHAVDHDSYPSPGRKFDRQSSGSRVDRRASGIVDDDRWIRPP
GSFGPGRDLRLDLGYGAVAGFRPVQGGNFGVLRHPRAQTPLPYLGGVPAGPMPHMSPHAG
MQHSGPDADRWHRGVMYQQKGMIPSPQSPLQTMHRAERKYQVGKVADEEEAKQRQLKGIL
NKLTPQNFEKLFEQVKAVNIDNAGTLTGVISQIFDKALMEPTFCEMYANFCQCLAGELPD
FIEDNEKITFKRLLLNKCQEEFERGEREQEEANKIEEEGEAKLSEEEREEKRIKARRRML
GNIRLIGELYKKKMLTERIMHECIKKLLGEYENPNEEDVEALCKLMSTIGEMIDHPKAKV
HMDAYFEMMVKLSNNMKLSSRIRFMLKDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQER
QAQSSRLARGPGFNAAARRASTDFSARGSILSSPGSQMDSFRGLQGQPHSSGAQDVRMDD
RQSLESRTLSVPLPQRPTGDDSITLGPQGGLGRGMSFRGPSVMSSTPLANISPISVDSRT
AGSNGFSSVSERMTYGPREDLMARFGSDRFAPTASYEQPSSQERGMHFGNRDSRTPDRSF
ARPLAASPSSQGQSSGFSQNIPPEKGCSEERLHDLSMEAIKEFYSARDEKEVALCIKDLN
SSSFHPTMIALWVTDCFERKDMERDLLAKLLVNLTRSHDGVLSQAELVKGFESVLSTLED
AVNDAPKAPEFLGRIFGKMIVENVMSLKEIGRLIGEGGEEARQLVEIGLGGDVIGSTLGM
IKRERGESVLNEIRGSSCLRLEDFRPSHPNRSRILETFL
NT seq
5700 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaatcaatctaggtccgataaaagcgaacaacaataccgaaaatccgggcga
tcagccagttttaatcaacagcggtcctcctcaggcgtttacagtaagggcgctggcggc
ggccctgccccttcgcggtctccttcttcatcttcttctttgtcttctaatcgaagtctt
aagaagtctagcaatgcacaaggagggcaataccggttaaattcaccggccgtgagttct
accgagtctagtagtacttctgctgcccgcaccaaaccaaatggtgctcatttgcaaccc
cagttactgggagcatcagatgcatcaattgcaggcaatgctgcccagcctgttcaatcg
cacaccattcagaatagcactcgaactgtttcaaaccctccaacttctcaacctgccgcc
ataagttctgacactagttttccttcaaccagcgaaaaagaagatgcatccaaaccattc
tctttacagttcgggtccataactcctggtttcatgaacggaatgcaggttccagctcga
actagctcagcacccccaaatttggatgaacagaaacgtaatcaggcacgccatgattct
tcttttaaatgtgtgccgaatttgcccattcccattcctaagcagcagctagcaagaaag
gattcggttgcaactgagcaatctagttctggggaggtttatccagtgcccaagataaaa
aaagatgcacaaccttctccagtaccccctgcaaaccagacacagaagccgtctcctctt
aatataccgatgacatcgatgcagatgccatttcatcaccagcctcatgttcccattcaa
tatggtgggcctaatccacagattcagtctcaaagtgttactgccagttcaatgcaaatg
ccaatgcatatctccttagctatgggaaatggaccccaggtgcagcagcaagtctttgtt
gcaggtcttcaggctcttccattgccacctcaagggatgatgcatcagggtgggggcttg
agtttcacaccatccataggtggccaccttccgcctcaattgggcaacttggggatgggc
attacccctcagtattctcaacagcaaggtggaaagtttggtgttccacgtaaaaccact
cctgtcaagattactcaccccgatactcatgaagaattaaggcttgataaacgaacagat
acacgtgcagatggtggttcttcagttccaaggcctcatcctaacatgccaatccaatcc
cagccaattccatcctttgctccttctcagtcaatcaattactattccaattcctataat
accaaatctggattttatccgccaccaagttcacggccattggctagtaaccagatagca
cctaatgcccaaggaccgagatttagctatcctggtagccagggtcatcaaaacatttct
ttcatgaattcagcagctacccatggttcattggcagttaataaatccgttcatcttgtt
cgtggcagtttagaatcagcaaatgtggaacccgtacgtgatgcacaaaatgttatgccc
tttactacttcaggtttaacacaggtgacagttaaaccagcttctgtttctgccggggag
aagtttgaagattcctcttcttctagtatcttgccttctattgaaaaggctggggcacta
aaaccttctacaccagctagcgaggttagttcatctgaggctcaaagggacttggatact
tgccaggagagctctgcacaacagccaaaatctggtaatgaatctttaacatctgagtca
ttaccagctgcagctaaacactctggtggagttccagtgcctaacttggatgagagccag
acatctagttgtgtatcgtctgcttcagattccacgtctagggagtctacgctagttctt
gccagtaatgaaggcaagaggagggagggattgagcaggtcaaactctataaaaaattat
cagaagaaaccaggtcaggaaggacaaattcagccaccagttcagtctacatcaacatcc
aacttggctaccaaccctgcagaatgtggtgtttcttcagatggtgcagttactgaagct
ctagaggctaaaaaagctttaacatcattagcagctgttgatgttttgtcacaatctacc
agggaattaccatccattaatgatgctttgccttcttccttagacccgaagacagagagc
aagatagaaagcttaaacactgtttcttctgaagtttctggtactggcagtaaagttgat
agctttgacattgttcagcatgctaagattgatggttcttccaagctggatgaacgacca
aggtctgaaattagtggaattaatgaagaggaaaaacattttcctgaagagcacttatct
tctcaactggttcccttgaaatctacagaacttaaatctgaccaggattctgcatcaaag
gtagtagctaccaacattgttgttcgtaccccaggaactgagcagagggtacacaatgaa
gatttgggaggcaaggtagaaaatgcggaagccactgatagtaaggatatctctacctct
agaattgctgaccctactggtgtcgaaagttctcatgttctcatgacctttggttccaat
ccttcttctagtccctctaatagctatgagatgactgctactaaaactgttatatcatcc
caccagtctgcacctgtcccaactcctgacctcttggagtcaacttcaaattatgaaggg
gaaggtgttctgctaactagttcaaaggacaaaccagcgccacaacttagtaggacaaag
agtactataactagtgggaggaaaaaactaaaagaaattcttcagaaagcggatgctgct
gggacaacttctgatctctatatggcgtataaaggtcctgaggaaaagaaagagactgtc
gcacctttagcaagtacagaaatcagttctgttggtgttaatttgaaacaggcatctcat
gaggcccttcaggtggatgccatagaaagtgagaaaattacacagagtaaagctgaactc
gatgattgggaagatgctgctgacatatctgcaccaaacatggaaacttcagacactgac
gaacaggctcatgggggattagcaagtcatgaggaagatggaagtgggaatataaagaag
aagtattccagagattttcttcttaagtttgcaggacaatatactgatcttccacaggga
tttgagattgcttctgatattgcagcggccttgatggcatcaaatgtcaatgcatctcat
gctgttgatcatgattcataccctagtcctggaagaaaatttgataggcaatctagtgga
tctcgagtagatcgccgtgctagtggaattgttgatgatgacagatggattagaccacct
ggttcttttggccctggaagggatctgcggcttgatcttggttatggtgctgttgcaggt
tttcggcctgtccaaggaggtaactttggtgttctaaggcacccgcgggcacaaacacct
cttccatatcttggaggggttcctgctggaccaatgccgcatatgagtccacatgcaggg
atgcagcacagtgggcctgatgctgacaggtggcatcgtggtgttatgtatcagcaaaag
ggtatgattccgtctccacaaagtccactgcagacaatgcacagagctgaaaggaagtat
caagtgggtaaagtggctgatgaggaagaggccaagcaaaggcagctgaagggcattttg
aacaagctaacccctcaaaattttgagaaactctttgagcaagtaaaagctgttaacatt
gacaatgcaggtacactcactggtgtcatctcacagatctttgacaaagctttaatggag
cctactttttgtgaaatgtatgcaaacttctgccagtgtctggctggggagttgcctgat
tttattgaagacaatgaaaagataactttcaagagattgctgctgaacaagtgccaggag
gaatttgagagaggggagagagagcaagaagaagcaaataaaatagaggaagagggtgag
gctaagctgtctgaggaagaaagagaggagaagagaatcaaggctcgaagacgaatgtta
ggtaacattagacttattggggagttgtacaagaagaaaatgttaactgagagaataatg
catgaatgcatcaagaaactacttggtgaatacgagaatcctaatgaggaagatgttgag
gcattgtgcaaattaatgagtacgattggagaaatgattgaccatcctaaggcaaaggtg
catatggatgcttattttgagatgatggtgaagttgtcaaacaatatgaaattatcttct
aggatcaggttcatgttgaaggatgctattgatctgagaaagaataaatggcagcagagg
aggaaagttgaagggcctaaaaagattgaggaagtgcacagagatgctgctcaagagcga
caagcacaatccagtaggcttgctcgtggtcctggcttcaatgctgctgcaaggagagca
tccacggattttagtgcacgagggtcaattttatcttctccaggttctcaaatggatagt
ttccgggggctgcagggtcaacctcatagttctggggctcaggatgttcgcatggatgac
agacagtctttggagtctaggactctgtcagttcccttgcctcaaagacctactggtgat
gattctattactttgggcccccagggtggccttggtagagggatgtcttttagaggacca
tctgtaatgtccagtactcccttagctaatatttctccaatttccgtagattcaagaact
gctggatcaaatggatttagttctgtatcagagcgcatgacttatggtcctagagaggat
ctcatggcaaggtttgggtcagacaggtttgcaccaacagcttcttatgagcagccaagt
tcccaggaacgtggcatgcattttggtaatagggactcgaggaccccagatcgcagtttt
gctagacctcttgcagcttcaccttcttcacaaggccaatcatctggtttcagtcaaaat
attcctcctgaaaaaggctgttccgaggagcgtctgcatgatttgtccatggaggcaatt
aaagaattttacagcgctagagatgagaaagaagttgctttgtgcatcaaagatttgaat
tcttcaagcttccatccgacgatgattgcgctatgggtaacggactgttttgagaggaaa
gacatggaacgggatcttttggcgaagctacttgtcaacctgacaaggtcccatgatggt
gtattgagccaggctgaacttgttaaagggtttgaatctgtcctgagtacattggaggac
gcagtgaatgacgcgccaaaagctccagaatttctgggacgtatttttgggaaaatgata
gtagaaaatgtgatgagtctgaaggagataggacggttaataggtgagggtggggaggaa
gcaaggcagctagtggaaatagggctgggcggggatgttattggaagcaccttggggatg
attaaaagagagagaggagaaagtgtgttgaatgaaattagaggtagctcctgtttgcgg
ctggaggactttcggccttcgcatcccaacagatcaaggattttagaaacttttctttaa
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integrated database retrieval system
