Gossypium raimondii: 105763767
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Entry
105763767 CDS
T04129
Name
(RefSeq) eukaryotic translation initiation factor 4G isoform X1
KO
K03260
translation initiation factor 4G
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105763767
03012 Translation factors [BR:
gra03012
]
105763767
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105763767
mRNA cycle factors
Stress granule specific factors
105763767
Translation factors [BR:
gra03012
]
Eukaryotic type
Initiation factors
eIF-4
105763767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
CNOT1_CAF1_bind
Motif
Other DBs
NCBI-GeneID:
105763767
NCBI-ProteinID:
XP_012437563
UniProt:
A0A0D2SYS5
LinkDB
All DBs
Position
12:complement(34636813..34644378)
Genome browser
AA seq
1890 aa
AA seq
DB search
MSFNQSRSDKSEQQYRKSGRSASFNQQRSSSGAYSKGAGGGPAPSRSPSSSSSSLSSNRS
LKKSNNAQGGQYRLNSLAANSTESSNTSAARTKQNGAHLQPQLQGASDASIASNVAQPVQ
SPIIQNSTRAVSKTPNSQPPTISSDSSLPTTAGKEDPSKAFSLQFGSITPGFMNGMQIPA
RTSSAPPNLDEQKRNQARHDSSFKSVPNLPTSIPKQQLPRKDSVATEQSSSGEAHSVPKI
KKDAQPSAVPPVNQTQKPSPVNIPMTSMQMPFHHQPQVPIQYGGPNPQIQSQSVTASSMQ
MPIHIPLAMGNGPQVQQQVFVAGLQALPLPPQGMMHQGGGLSFTPPIGGQLTPQLGNLGM
GIAPQYSQQQGGKFGVTRKTTPVKITHPDTHEELRLDKRTDIRADGGSSVPRSHPNMPSQ
SQPIPSFAPSHSINYYSNSYNTNSVYYPPPSSLPLAGSQIAPNAQGPRFNYPVSQGHQNI
SFMNSAAAPGSLAVNKSVNHACGTSESVNVDPVRDAQNVISFATSGSTQVTVKPATVSAG
EKFEDSSFSSISPSTEKAGSLKHSMPACEVSSSQAQRDLDTFPESSVQQPKLGNESLTSE
SLPAAAKHSGGVPATNLDESQPSSCVSSASDSTSKESTPVFASNEGKRREGLSRSNSIKN
YQKKPVQEGQIQPPVQSTSTFYLGTNPAEYGVSSESAVTEALVAKKALTSLAAADVLSQS
TREFTAINEALPSSLDPKTESKIECLISVSSEVSGTGSKLDSFGLVKHAKFDGSSKLDEL
PRSEISGINDEEEKHLPEEHLKDSVSLEISSQPVPLKSTELKSDQDSASKVVATDNVVHT
QGTEHRVLNEDLSGKVENVEVTDSKDISTSRIADSTDIEGSHVTKSGILDQQSAPVPSPD
LLESSSNYEGEGVPLPSSKDKPAPQLSRTKSTITSGKKKRREILQKADAAGTTSDLYMAY
KGPEEKKETVAPSASVETNSVGVNLKQTSHEALQVDAIEREKITQSKAELDDWEDAADIS
TPNLETSDTDEKAHGGVPSHEEDGSGNITKKYSRDFLLKFAGQYTDLPQGFEIASDIAAA
LMAANVNASHAVDHDSYPSPGRKLDRQSSGSRLDRRASGIVDDDRWMRPPGPFGPGRDLR
LDLGYGAVAGFRPVQGGNFGVLRHPWAQTPLPYLGGVPGGQMLHMSPHGGMQHSGPDADR
WHRGVMYQQKGLIPSPQTPLQTMHRAERKYQVGKVTDEEEAKQRQLKSILNKLTPQNFEK
LFEQVKAVNIDNAVTLTGVISQIFDKALMEPTFCEMYANFCQCLAGELPDFIENNEKITF
KRLLLNKCQEEFERGEREQEEANKIEEEGEAKLSEEEREEKRIKARRRMLGNIRLIGELY
KKKMLTERIMHECIKKLLGEYENPDEEDVEALCKLMSTIGEMIDHPKAKVHMDAYFERMA
KLSNNMKLSSRIRFMLRDAIDLRKNKWQQRRKVEGPKKIEEVHRDAAQERQAQSGRLARG
PGFNATARRAPMDFSPRGPMLSSPVSQMSSFRGLQGQPHGFGAQDVRMDDRQSLESRTLS
VPLPQRPTGDDSITLGPQGGLGRGMSFRGPSVMSSTPLANISPISGDSRRTAGSNGFSSV
SERTTYGPREDLMPRFGTDRVAPTAAYEQPSSQERGINFGNRDSRTPDRSIVRPLAASPS
TQAQSSGFSQNIPPEKGWSEERLRDMSMEAIKEFYSARDEKEVVLCIKDLNSTSFHPTMI
ALWVTDCFERKDMERDLLAKLLVNLTRSHDGVLSQAELIKGFESVLSTLEDAVNDAPKAP
EFLGRIFGKMVVEDVISMKEIGRLILEGGEEAGQIVEIGLGGDVMGSTLGMIKTEKGESV
LNEIRGSSCLRLEDFRPSHPNRSRILETFF
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcaatcaatctaggtcggataaaagcgagcaacaataccgaaaatccgggcga
tcagccagttttaatcaacagcggtcctcctcaggcgcttacagtaagggcgctggcggc
ggccctgccccctcgcggtctccttcatcatcttcttcttctttatcttccaatcgaagt
cttaagaagtctaacaatgcacaaggagggcaataccggttaaattcactggccgcgaat
tctaccgagtctagtaatacttctgctgcccgcaccaaacaaaatggcgctcatttacaa
ccccagctacagggagcatcagatgcatcgattgcaagcaatgttgcccagcctgttcaa
tcacccatcatccagaatagcactcgagctgtttcgaaaactccaaattctcaaccaccc
accataagttccgacagtagtctccctacaaccgctggaaaggaagatccatccaaagca
ttctctttacagtttgggtccataactcctggtttcatgaatggaatgcagattccagct
cgaactagctcagcacccccaaatttggatgaacagaaacgtaatcaggcacgccatgat
tcttcttttaagtctgtgccgaatttgcccacttccattcctaaacagcagctaccaaga
aaggattcagttgcaactgagcaatctagttctggggaggctcattcagtgcccaagata
aaaaaagatgcacaaccctctgctgtaccccctgtgaaccagacacagaagccgtctcct
gttaatataccaatgacatctatgcagatgccatttcatcaccagcctcaggttcccatt
caatatggcgggcctaatccacagattcagtctcaaagtgttactgctagttcaatgcaa
atgccaatccatatccccttagctatgggaaatggacctcaggtgcagcagcaagtcttt
gttgcaggtcttcaggctcttccattgccacctcaagggatgatgcatcagggtgggggc
ttaagtttcacgccacccataggtggccagcttacgccacaattgggcaacttggggatg
ggcattgcccctcagtattctcaacagcaaggtggaaagtttggtgttacacgtaaaacc
actcctgtcaagattactcaccctgatactcatgaagaattaaggcttgataaacgaaca
gatatacgtgcagatggtggctcatcagttccaaggtctcatcctaacatgccttctcaa
tcccagccaattccttcctttgccccatctcattctatcaattactattccaattcctat
aataccaattccgtatattatccgccaccaagttcactgccattggctggtagtcagata
gcacccaatgcccaaggaccgagatttaactatcctgttagccagggtcatcaaaacatt
tctttcatgaattcagcagctgcccctggttcattggcagttaataaatctgttaatcat
gcgtgtggcacttcagaatcagtgaatgtggatcctgtacgtgatgcacaaaatgttata
tcctttgctacctcaggttcaacacaggtgacagttaagccagctactgtttctgctggg
gagaagtttgaagattcctctttttcaagtatctcgccttctactgaaaaggctgggtcg
ctaaaacactctatgccagcttgtgaggttagttcgtctcaggctcaaagggatttggat
actttcccggaaagctctgtacaacagccaaaacttggtaatgaatctttaacatccgag
tcattaccagctgcagctaaacactctggtggagttccagcgactaacttggatgagagc
cagccatctagttgtgtatcttctgcttcagattccacatccaaggagtctacgccagtt
tttgccagtaatgaaggcaagaggagggagggattgagtaggtcaaactctataaaaaat
tatcagaagaaaccagtacaagaaggacaaattcagccaccagttcagtctacatcaaca
ttctacttgggtaccaaccctgcagaatatggtgtttcctcagaaagtgccgtcactgaa
gctctagtggctaaaaaggctttaacatcattagcagctgctgatgttttgtcacaatct
actagggaatttacagccattaatgaggctttgccttcgtccttagacccgaagacagag
agcaagatagaatgcttaatctctgtttcttctgaagtttctggtactggcagtaaactt
gatagctttggccttgtcaagcatgctaagtttgatggttcttccaagctggatgaacta
ccaaggtctgaaattagtggaattaatgatgaagaggaaaaacatttacctgaagagcac
ttaaaagacagcgttagccttgagatttcttctcaaccagttcccttgaaatctacggag
cttaaatctgaccaggactctgcttcaaaggtagtagctaccgacaatgttgttcatacc
caaggaactgagcacagggtactaaatgaagatttgagtggcaaggtggaaaatgtggaa
gtcactgatagtaaggatatctctacctctagaattgctgactctactgatatcgaaggt
agtcatgttactaaatctggcatattggaccagcagtctgcacctgtcccatctcctgat
ctcttagagtcaagttcaaattatgaaggggaaggtgttccgttacctagttcaaaggac
aaaccagcgccacaacttagtaggacaaagagtactataactagtgggaagaaaaaaaga
agagaaattcttcagaaagcagatgctgccgggacaacttccgatctctatatggcgtat
aaaggtcccgaggaaaagaaagagactgttgcaccttcagcaagtgtggaaaccaattct
gttggtgtgaatttgaagcagacatctcatgaggcccttcaggtggatgccatagaaaga
gagaaaattacacagagtaaagctgaactcgatgattgggaagatgctgctgacatatct
acaccaaacttagaaacttcagacactgacgaaaaggctcatggaggtgtaccaagtcat
gaggaagatggaagtgggaatataacgaagaagtattcccgagatttccttcttaagttt
gctggacagtatactgatcttccacagggatttgagattgcttctgatattgcagcggcc
ttgatggctgcaaatgtcaatgcatctcatgctgttgatcatgattcatacccaagtcct
ggaagaaaattagataggcaatctagtggatctcgattagatcgccgtgctagtggaatt
gttgatgatgacagatggatgagaccacctggtcctttcggccctggaagggatctgcga
cttgatcttggttatggtgctgttgcaggttttcggcctgtccaaggaggtaactttggt
gttctaaggcacccgtgggcgcaaacacctcttccatatctcggaggggtccctggtggg
caaatgctgcatatgagtccacatggagggatgcaacacagtggtcctgatgctgacagg
tggcatcgtggtgttatgtatcagcagaagggtttaattccctctccacaaactccattg
cagacaatgcacagagctgaaaggaagtatcaagtgggtaaagtgactgatgaggaagaa
gccaagcaaaggcagctgaagtccattttgaacaagctaactcctcaaaattttgagaaa
ctctttgagcaagtaaaagctgttaacattgacaatgcagttacactcactggtgtcatc
tcacagatatttgacaaagctttgatggagcctactttttgtgaaatgtatgcaaacttc
tgccagtgtctggctggggagttgcctgattttatcgagaacaatgaaaagataactttc
aagagattgctgctgaacaagtgccaggaggaatttgagagaggggagagagagcaagaa
gaagcaaataaaatagaggaagagggtgaggctaagctgtctgaggaggaaagagaggag
aagagaatcaaggctcgaagacgaatgttaggtaacattagacttattggggagttgtac
aagaagaaaatgttaactgagagaataatgcatgaatgcatcaagaaactacttggtgaa
tacgagaatcctgatgaggaagatgtcgaggcattgtgcaaattaatgagtacgattgga
gaaatgattgaccatcctaaggcaaaggtgcatatggatgcttattttgagaggatggcg
aagttgtcgaacaatatgaaattgtcttctaggatcaggttcatgttgagggatgctatt
gatctgagaaagaataaatggcagcagaggaggaaagttgaagggcctaaaaagattgag
gaagtgcacagagatgctgctcaagagcgacaagcacaatccggtaggcttgctcgtggt
cctggcttcaatgctactgcaagaagagcacccatggattttagtccacgagggccaatg
ttatcttctccagtttctcaaatgagtagtttccgggggctgcagggtcaaccccatggt
tttggggctcaggatgttcgcatggatgacagacagtctttggagtctaggactctatcg
gttcccttgcctcaaagaccaactggtgacgattctattactttgggcccccagggtggc
cttggtagagggatgtcttttagaggaccatctgtaatgtccagtactcccctagctaat
atttctccaatttctggagattcaagaagaaccgctggatcaaatggttttagttctgta
tcagagcgaacgacttatggtcctagagaggatctcatgccgagatttggaactgatagg
gttgcaccaacagctgcttatgagcagccaagttcccaggaacggggcataaattttggt
aatagggactcgaggaccccggatcgcagcattgttagacctcttgcagcttcaccttcc
acacaagcccaatcatctggtttcagtcaaaatattcctcctgaaaagggctggtctgag
gagcgcctgcgtgatatgtccatggaggcaattaaagaattttatagcgctagagatgag
aaagaagttgttttgtgcatcaaagatttgaattctacaagcttccatccaacaatgatt
gcactatgggtaacggactgttttgagagaaaagacatggaacgggatcttttggcgaag
ctacttgtcaacctgacaaggtcccatgatggtgtattgagccaggctgaacttattaaa
gggtttgaatctgtcctgagtacattggaggatgctgtgaacgatgcgccaaaagctcca
gaatttctgggacgtatttttgggaaaatggtagtggaagatgtgataagtatgaaggag
atagggcggttaatactggagggtggggaggaagcagggcagatagtggaaatagggctg
ggcggggatgtaatgggaagcaccttggggatgattaaaacggagaaaggagaaagtgtg
ttgaatgaaattagaggtagctcctgtttgcggctggaggactttcggccttcgcatcct
aacagatcaaggattttagaaacttttttttaa
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integrated database retrieval system
