Gossypium raimondii: 105763769
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Entry
105763769 CDS
T04129
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105763769
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105763769
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
105763769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-ANAPC11
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
DUF5575_C
zf-RING_16
TLC
Motif
Other DBs
NCBI-GeneID:
105763769
NCBI-ProteinID:
XP_012437566
UniProt:
A0A0D2RDJ2
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All DBs
Position
12:34649345..34651330
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AA seq
364 aa
AA seq
DB search
MHFILIYFNNLPSFVTSFSFLLAASSMASPPALLGVTGVAVTAAENNATVPSHPSSSSTE
NVNPSIIIIVSILSITVIVSVCICLLLRHLNRRCLRRLSPSSTSTITASSAHRISPEQSS
PPTTSLLDSLPLFTFSSLTSRTNKDSTVSGDCAVCLSKFEPMDQLRLLPLCCHAFHAQCI
DTWLTSNKTCPLCRSPLLASDSDLIKLSLQFSNVSGVIGTGGSDSFRLEIGSISGRQPGS
ESVERGRSYSVGSFDYIVEEESEITRNQTHRRNLSDKEELGGAEPALEASLAGEVANERS
WLKDYVDRLSSSLSSRTMSFRSSGRLFTGSSRRSEISGATEDYDVEANRIGEEISEMFRW
FSGV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcacttcatcctcatctacttcaacaaccttccttcttttgttactagcttttctttt
ttgttggcggcgtcatcgatggcttcgccacctgcgttgttaggcgttacgggagtagct
gtcacggcagccgaaaataatgccactgtaccctcgcatccttcttcttcttcgactgag
aacgtgaacccgagtataattataatagtttctatactttccattacggtgattgtttcc
gtatgtatttgtcttctccttcgccacctcaatcgccgttgcttgcgtcgcctctctcct
tcatctacgtccactatcaccgcttcttctgcccaccgtatcagtcccgaacaatcatca
ccaccgacaacttcgttgcttgattcgcttcctttgttcacattctcttcacttactagc
cgcaccaacaaggattcaaccgtttccggagattgcgcggtttgtttgtccaaatttgaa
ccgatggatcaactcaggcttctccctctttgttgccacgcgttccatgctcaatgcatt
gatacttggctcacttcaaacaaaacttgccctctatgtcgctctcctctcttagcttcc
gactccgatctcataaagctttcgcttcagttttctaacgtatccggcgtgatcgggact
ggcggcagcgacagtttccggctggagattggctctatcagtggccgtcaaccaggctcc
gaatccgttgaacggggaagatcttattccgttggctctttcgattatatcgtggaggaa
gaatcagagattactaggaatcaaacgcatcggagaaacttgtccgataaggaagaactt
ggaggagctgagccagctttggaagcgagcctcgccggggaagttgctaatgagaggagt
tggcttaaggactacgtggataggctatcttcttccttatcgtctcgtaccatgtcgttt
cgcagctcaggtaggctctttaccggaagcagtcgccgaagcgaaatctccggcgccact
gaagattatgacgtggaagccaatcgcataggtgaggagatcagtgaaatgtttcgttgg
ttctcaggggtatga
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integrated database retrieval system