Gossypium raimondii: 105763900
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Entry
105763900 CDS
T04129
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 13 isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
gra
Gossypium raimondii
Pathway
gra04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
105763900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gra04040
]
105763900
Ion channels [BR:
gra04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105763900
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
105763900
NCBI-ProteinID:
XP_012437760
UniProt:
A0A0D2T539
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Position
12:36863273..36869081
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AA seq
719 aa
AA seq
DB search
MTIRRDKFVRFKDWSSDDGSFTSKVRPSFSAVIEGARKLFENGSERARELFENGSERVKG
LKKPVNFGFSSTKQPKKDKAVSSKKRTLNPQGEFLQNWNKMFLLSCAIALAIDPLFFYIP
VVKGNLKCLDLDNKLGIVASVLRTLIDAFYVIHIVFQFRTAFIAPSSRVFGRGELIEDPW
AIAKRYLFKNFFIDILAILPLPQMVVIIIKSSLRGSVSEITKDLLKTFIFIQYVPRILRI
VPLFKEVTTTSGILTKSAWTGAALNLFLYMLASHAVGAFWYLFSIERQDRCWRNAVNGDV
AVLYCHKGITRNDTLVNMLNTTCSLINPDDLKDPKHFNFGIFFDALESGVVETMDFPMKF
LYCFWWALRNLSSLGQNLKTSTYVWEILFAIAIAIGGLILFSLLIGNMQKYLESTGVRVE
EMRVKRQDAEQWMSHRMLPENLRERIRRYEQYKWQETRGVEEEALIANLPRDLRRDIKRH
LCLDLLKRVPMFDKMDEQLLDAMCDRLKPVLYTDKSYILREGDPVEEMLFIIRGNLTSTT
TNGGRTGFFNSAHLKAGDFCGDDLLTWALDPQSSSNLPISTRTVQALKEVEAFALMADDL
KFVASQFRRLSSKQFMHTFKFYSVRWQTWAAAFIQAAWRRHCRRKQVKSLREAEGEPLAA
LANGNETSPSLGATLYASKFAVNALRTLRRHGSQSSPRLPQRLSPLLPQKPAEPDFTAE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgactatccggcgagacaaatttgtaaggttcaaagattggagttcagatgatggatca
tttacatcaaaagttagaccatcattcagtgctgttatagagggtgcccggaaactgttc
gagaatggttccgaacgtgcccgggaactgttcgagaatggttccgaacgagttaaaggc
ttaaagaaaccagtgaatttcgggttttcgagtacaaagcaaccgaagaaagacaaggca
gtgagttcaaagaagaggactcttaatccacaaggagagtttcttcaaaactggaacaaa
atgttccttctttcatgtgccattgctctagctattgatcctttgttcttttacatccct
gtggttaagggaaatttgaaatgcctcgacttggacaacaaactcgggatcgttgctagt
gtccttcgtactttaatcgacgctttttacgtcattcatatcgtgtttcaattccgtacc
gcattcattgccccttcgtcgcgtgtattcggtagaggcgagttgattgaagatccttgg
gctatcgcgaaacggtatttgttcaagaacttcttcatcgatattcttgctatcttacca
cttccacagatggtggtcataatcataaaatcatcattgagaggctccgtttcggagatc
acgaaagatttattgaaaacctttattttcatccaatacgtgccgagaatccttcgaatc
gttcctcttttcaaagaagttacaaccacttccggcatattaaccaaatcggcatggacc
ggtgctgctttgaatctcttcctatacatgttagctagtcatgcagttggagccttttgg
tacttgttttcgatcgaacgacaggaccggtgttggcgtaatgctgtaaatggcgacgta
gccgtgttgtactgtcataaaggcataacaagaaacgatacattagtgaatatgctgaat
actacctgctcgttaatcaatcccgacgacttgaaagatccgaaacacttcaacttcggg
atatttttcgatgcactcgagtccggtgtggtggaaaccatggattttcctatgaagttc
ttgtactgcttttggtgggctttgcgtaatctaagttctttaggccaaaatctcaaaaca
agtacctatgtgtgggagatattgtttgccattgccattgccattggtggcttgattctg
ttttcactgctcattgggaacatgcagaaatatctagaatcaacaggggtgagagtggag
gaaatgagggtgaaaaggcaagatgcagagcaatggatgtcacaccggatgctaccggag
aaccttagggaacgtataaggcgatatgaacagtacaaatggcaagaaaccagaggtgtt
gaagaagaagccctcattgctaaccttcctagggatctcagaagagatataaagagacat
ctttgcttggatcttctcaaaagagtgccaatgttcgacaaaatggatgaacaactatta
gatgcaatgtgtgatcgtctcaaaccagtgctttacaccgacaagagctatattctccga
gaaggtgatccggtggaggagatgctgtttattatccgagggaatctgacaagtacgacc
acaaacggcggaagaaccggtttcttcaactctgctcatctcaaagccggtgacttttgc
ggcgacgatcttctcacatgggcattggatccccaatcatcgtcgaacctaccgatctcg
acgagaacagtgcaggccttgaaagaagttgaagcttttgctttaatggcggatgatttg
aaattcgtggcttctcagtttcgacgtcttagcagcaagcaattcatgcatactttcaag
ttctactcggtgagatggcagacatgggccgcggcgtttatacaagcagcttggcgccga
cactgcaggaggaagcaggtaaagtcactacgtgaagccgagggagagccgcttgcagct
ctggcaaacgggaacgaaacctcaccaagcctcggtgccacgctttacgcttcaaaattt
gccgtcaatgcgttacgaacgttgcggaggcatggttcgcaaagcagccctagattgcct
caaagattgtcgccgttgcttcctcaaaagccagccgagcctgattttacggctgaataa
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