Gossypium raimondii: 105763956
Help
Entry
105763956 CDS
T04129
Name
(RefSeq) 3-ketoacyl-CoA synthase 1
KO
K15397
3-ketoacyl-CoA synthase [EC:
2.3.1.199
]
Organism
gra
Gossypium raimondii
Pathway
gra00062
Fatty acid elongation
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
gra04626
Plant-pathogen interaction
Module
gra_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
105763956
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
105763956
Enzymes [BR:
gra01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.199 very-long-chain 3-oxoacyl-CoA synthase
105763956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAE1_CUT1_RppA
ACP_syn_III_C
Chal_sti_synt_C
Chal_sti_synt_N
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
105763956
NCBI-ProteinID:
XP_012437814
UniProt:
M9Z5H7
LinkDB
All DBs
Position
12:37729512..37731722
Genome browser
AA seq
531 aa
AA seq
DB search
MDRDSIEMDKERLTAEMAFKDSSSAVIKIRKRLPDFLQSVKLKYVKLGYGYSCNPATVLM
FALIVPLFVVTAVQFTGLKLDGVSELWTNQALRLESIDAATRLAGSLILFFLFGLYYAKR
SRPVYLVDFACYKPEDDRKMSVDSFLKMTEDSGAFTEETLQFQRRISTRSGLGDETYFPR
GITSTPPNLCMEEARAEAETVMFGAVDELFAKTGVDPKEIGILIVNCSLFNPTPSLSAMI
VNHYKLRTNINSYNLGGMGCSAGLISIDLAKNLLQSNPNTYALVVSTENITLNWYFGNDR
SMLLCNCIFRMGGAAVLLSNKPRDKSRSKYQLVHVVRTHKGADDKHYNCVYQREDDKGTI
GVSLARELMAVAGDALKTNITTLGPLVLPFKEQFMFFVTLVRKKILKAKVSPYIPDFKLA
FDHFCIHAGGRAVLDELQKNLQLTDWHMEPSRMTLYRFGNTSSSSLWYELAYTEAKGRVS
DGDRVWQIAFGSGFKCNSAVWRALRSTPMAESRGNPWKNEIEKYPVKVSFA
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggatagggatagcatagagatggataaagagcggttgacggcggaaatggcgttcaaa
gactcatcctccgccgtcatcaagatccgtaaacggttgcctgatttcttacaatctgta
aaacttaaatatgtgaagttaggttatggctattcatgtaatcccgctaccgtgcttatg
tttgctttaatcgtaccgttgttcgtcgtcacggcggttcagttcaccggtctgaaactt
gacggagtttccgagttatggactaaccaagcccttcggttagaaagcattgatgccgca
acgaggctagccggttcgttaatcttattcttcttgttcggtctctactacgcgaaacgc
tctagaccggtttatctcgtcgacttcgcttgttacaaaccggaagacgatcgtaaaatg
tcggtcgactcgtttttgaagatgacggaagatagcggtgctttcacggaggaaacactt
cagtttcaaagaaggatatcgacccggtccggtttaggcgacgaaacatatttcccgaga
gggataacgtcaacaccgccgaatctgtgtatggaagaagctcgagctgaagcggaaact
gtcatgttcggagccgtcgatgaactttttgcaaaaaccggagttgacccgaaggaaatc
ggtatccttatagtgaactgcagcttgtttaatccaacaccatcgttatccgccatgatt
gtaaaccattacaagctacgtacaaacatcaacagctataatcttggtggaatggggtgt
agtgctggtcttatatcaatcgatttagctaaaaaccttcttcaatcaaaccccaacacg
tatgctttagtggtaagcactgaaaacattacattaaactggtattttggcaacgacagg
tctatgttgttatgcaattgtatattccgaatgggcggagccgccgtgttgttatcgaac
aaaccacgggataagtctcgttcaaagtaccaacttgttcacgtggttcgaacccataaa
ggtgctgatgacaaacattacaactgtgtttatcaaagagaagatgacaaaggaaccatc
ggtgtctcattagctcgtgaattaatggctgtcgccggtgatgctttgaaaacgaacatc
actactttaggtcctcttgttttaccatttaaagaacagttcatgttctttgtcaccctt
gttagaaagaagattttgaaagccaaagtgagtccttatatacccgattttaagcttgct
ttcgaccatttttgtatccatgccggtggaagagcagtattagatgaattacagaagaat
ctacagttaacagattggcatatggaaccatcaaggatgactttatatagattcgggaac
acatcgagtagttcgttatggtatgaattggcttacacagaagctaaaggtcgtgtctcg
gatggtgatcgggtatggcagatagcattcgggtcgggttttaagtgtaacagtgctgta
tggagagctcttaggtcgactcccatggcggaatcaaggggtaatccatggaagaatgaa
attgaaaagtatccggtcaaggtatcttttgcttga
DBGET
integrated database retrieval system