Gossypium raimondii: 105764022
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Entry
105764022 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105764022 isoform X3
KO
K24737
WD repeat-containing protein 6
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gra04990
]
105764022
Domain-containing proteins not elsewhere classified [BR:
gra04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
105764022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR35_TULP_N
DUF8242
Motif
Other DBs
NCBI-GeneID:
105764022
NCBI-ProteinID:
XP_012437919
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All DBs
Position
12:complement(38968871..38977916)
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AA seq
1308 aa
AA seq
DB search
MADSQLKQCQWNIRSSQYLGEISALCFLHLPSHLSSFPFLLAGTGSQVLLYDLESSMMIK
SFQVFEGIRVHGLICSLLDNATLGCKVVVCGEKRVKLFNLTFELVSKSNTQSEFCVDLCL
LHSLPRFTHWVLDALFLKDHCLAIGCSDNSVHVWDMLKSSLVLQVPSPDRCLLYSMRLWG
DNLEALRIASGTIYNEIIVWKVICQHDSPTSTSSVKGCMNLSSSNSNFAKCYDQQYKAVH
ICRLVGHEGSIFRIVWSSNGVKLVSVSDDRSARIWTIHDHDDRREIVGPVLFGHSARIWD
CCISDHLIVTAGEDCTCRVWGLDGKQLWVIKEHIGRGIWRCLYDPNSSLLVTAGFDSAIK
VHRLHTSVCKTLDLEGDADSEDIIEGAQISITCIPNSMEHAGLMDSKSEYVRSLYFKCED
TIYVATNHGYLYHALLSETGDVKWTELVRVNGEVPIVCMDLLSASLSRNHCGVDDWVAVG
DGKGNMTVVGITGNPSSPKVAFAFAWPAGAERQLLGTYWCKSLGSRYVFTTNPRGVLKLW
RLYDPSISVCQDSQRISLIAEFPSSFGIRIMCLDASFEEEVLVCGDLRGNLILFPLSKDL
LLCTAATSGVKISPLSYFKGAHGISTVSNISVSRLRHGQVEIRTTGADGCICYLEYDKDQ
ESFEFIGMKQLKELSLIESVSADFKSADDLANRNYAAGFASTDFIIWNLLTEAKVLQIPC
GGWRRPHSYYLGDVPEMRNCFAYVKDEIIYIHRHWLPGGCKTKFPRNLHLQFHGREMHSL
CFVSENSQVQGNEEENLVDKSSWIATGCEDGTVRLTRFAPEMENWSASKLLGEHVGGSAV
RSICFVSKTHIIPSDVSSRPGLEKGQNDTSDGKQNPCLLVSVGAKRVLTTWLLRNRSLDE
EEEIYPEQKLNRCETGCKPTVKQCSSMSFRWLSTNMPIRSPSMEGRAKTMSATNKISSLD
SDAKTGSTLIEKEGTKSKTCSVNKYEDDWRYLAVTAFLVKCAGSRLTVCFVVVACSDATL
TLQALVLPHRLWFDVAILASMPSPVLALQHAVVPFCNLTHISSTYLVITGATDGNITFWD
ITESVETFVQRVSSLNIEKFIDCQKRPRTGRGSQGGRQWRSLNSSMSKRRLGGDSVTRKA
GDVDNSDSNITPDTSSELNDLQKRSKNCSQAEHDTLLEPETSRTDSLTEICEIQPIHVMN
NVHQSGVNCLHVSGDFQGSENCYLLNIVSGGDDQAVHCLQLKLTLSSTELDAKVVTSETI
RSTIQSESIENIVDRSNKNQAPNHIRFLNQYRIPSAHSSAIKAALLLG
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcgcagctgaaacaatgccaatggaacatacgtagcagtcaatacctcgga
gaaatctcagccctttgttttctccaccttccctctcatctctcttctttcccttttctc
ctcgccggtactggttctcaagttcttctttatgatctagaatcatcaatgatgataaaa
tcttttcaagtctttgaaggcattcgcgtacatggactcatttgtagcttgcttgataat
gctactttaggttgtaaagtagttgtttgtggtgaaaaaagagtaaaattatttaattta
acctttgaattggtgtctaaatcaaatacccagagtgagttttgcgtcgacttgtgttta
cttcactctttgcccagatttactcattgggttctggatgctttgttcttaaaggaccat
tgtcttgctattggatgtagtgacaactctgttcatgtttgggatatgttaaagtctagt
ttggttcttcaagttccatctccagataggtgccttttgtattccatgcgattatggggt
gacaatcttgaggctcttcgaattgcttctggtacaatttataatgagattatagtctgg
aaagtcatttgtcaacatgattcaccgacttcaacaagttctgttaaaggttgcatgaat
ttaagcagctcaaattccaactttgccaagtgttatgatcagcagtataaagctgttcat
atatgtagacttgtgggacatgaaggttcaatatttcgcattgtctggtcttccaatgga
gtcaaacttgtttccgtgtcagatgatcggagtgctcgtatctggacaatacatgatcat
gatgatagaagggagattgttggtcctgtgctctttggccatagtgctcggatttgggac
tgctgtatttctgatcatttaattgttactgctggtgaggactgcacgtgtcgtgtgtgg
ggtctggatggaaagcagctttgggtgattaaggaacatataggaagaggcatttggcga
tgtttatatgatccaaattcttcacttcttgttaccgctgggtttgactctgctattaaa
gttcaccggttgcacacttctgtttgtaagacattggacttggaaggagatgctgattct
gaagatataattgagggagcacagataagcattacttgcatcccaaattcaatggagcat
gctggactcatggacagcaaaagtgaatatgtgcgctccttgtattttaaatgtgaagat
accatttatgttgctacgaatcatggttatctctatcatgctctattatctgagacaggg
gatgtcaaatggactgaactggtccgtgtcaatggagaggttccaattgtttgtatggat
ctgttgtcagcaagcctttccagaaaccattgcggtgtagatgattgggttgctgttgga
gatggtaaaggaaacatgactgttgttggaatcactggtaatccttcctcacccaaagtg
gccttcgcctttgcttggccagctggagcggagaggcaactcttaggaacttactggtgt
aagtcacttggatctaggtatgtctttaccactaatcccagaggagttttgaagctgtgg
aggctatatgacccctcgatatctgtttgtcaggattctcaaagaatatcccttatagct
gaattcccttcgagctttggaatacgaattatgtgtttggatgcctcatttgaggaagaa
gtactagtctgtggagatctgcgtggtaatctgattctgttccctttatcaaaagaccta
ttgctatgcacggctgccacttcgggtgtgaagatatctccactaagttatttcaaagga
gctcatgggatttcgactgtgtccaacatttcagtttctagattgaggcacggtcaagtt
gaaatccgaacgactggagcagatgggtgcatatgttatttagaatatgataaggaccaa
gaaagttttgaatttataggaatgaaacaattgaaagaattgagtttgattgaatctgtc
tccgctgatttcaagtctgctgatgatctggcaaaccgcaactatgctgctggttttgcg
tcaacggatttcataatatggaatttgctaactgaggcaaaggttttgcaaattccatgt
gggggatggcgacgtcctcattcctattaccttggtgatgtaccggagatgaggaactgt
tttgcatacgtcaaggacgaaattatctatattcataggcattggttaccaggaggctgt
aaaacaaaattccctcggaatttacacttacagtttcatgggagagagatgcattcctta
tgctttgtttctgaaaattcgcaagttcaaggaaatgaagaggaaaacttagttgacaaa
tctagttggattgcaactggatgtgaagatggaactgtgaggttaactaggtttgctccg
gaaatggagaattggtctgcatctaaattgcttggggaacatgttggtggatctgctgtt
agatcaatatgcttcgtgtcaaagacacatataattccttctgatgtatccagcaggcct
ggcttggaaaagggacaaaacgacacttcagatggcaaacaaaatccatgtttgctggtt
tccgttggtgcaaagcgtgttctgacaacttggttactaaggaataggagtctggacgag
gaggaagaaatataccctgaacaaaagctcaacagatgtgaaaccgggtgtaaaccaaca
gtcaaacagtgttcatcgatgtcatttaggtggctttccacgaatatgccaataagaagt
cctagcatggaaggaagagcaaaaaccatgagtgctaccaacaaaatttctagccttgat
agtgatgcaaagactggatcaactcttatagagaaagagggaacaaagtcaaaaacttgc
tcggtgaataagtatgaagatgattggagataccttgctgtaactgcttttcttgttaaa
tgtgccggttccaggttgactgtctgttttgttgtcgttgcttgttcagatgccacgtta
acattgcaggctctggtcttaccacatagattatggttcgatgttgctatattagcttcg
atgccatccccggttttagcattgcagcatgcagttgtccctttctgtaatttaacccat
attagcagcacgtaccttgtgataactggagctactgatggcaatattaccttttgggac
ataactgagagtgttgaaacctttgttcaacgagtatccagtcttaatatagagaagttc
attgattgtcagaaacggccacgtacaggaagaggaagtcaaggaggacggcaatggaga
tcactgaacagtagcatgtctaagagaagacttggtggtgactcggtaactagaaaagct
ggagatgtggataatagcgattcaaatattacacctgacacatcttcggaattaaatgac
cttcaaaagaggtcgaagaactgttctcaagccgagcatgacactttgctcgagccagag
accagcagaaccgattccttaaccgagatatgtgaaatacagcctatacatgttatgaat
aatgtacaccaatctggtgtgaattgtctccacgtttcaggggacttccaaggttccgag
aactgttatctgttaaatattgtcagcgggggtgatgaccaagcagttcattgtcttcaa
ctgaagctgacactgtcatcgactgagttagatgctaaagttgtgacctcggaaacaata
agatcaaccattcagtccgaaagtattgagaacattgtagatcgtagcaataagaaccag
gccccgaatcacatcagattcctcaatcaatatagaatcccctcagctcatagttctgct
ataaaagctgcgcttcttctaggctga
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