KEGG   Gossypium raimondii: 105764125
Entry
105764125         CDS       T04129                                 
Name
(RefSeq) DNA mismatch repair protein PMS1
  KO
K10858  DNA mismatch repair protein PMS2
Organism
gra  Gossypium raimondii
Pathway
gra03430  Mismatch repair
gra03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    105764125
   03460 Fanconi anemia pathway
    105764125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gra03400]
    105764125
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    MutL homologs
     105764125
SSDB
Motif
Pfam: DNA_mis_repair MutL_C HATPase_c_3 HATPase_c
Other DBs
NCBI-GeneID: 105764125
NCBI-ProteinID: XP_012438053
UniProt: A0A0D2U395
LinkDB
Position
12:complement(40422801..40429559)
AA seq 967 aa
MEGSPQSKSPVIKPINKGVVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGE
EWFQVIDNGCGISPANFKVVALKHHTSKLADFPDLESLTTFGFRGEALSSLCALGNLTIE
TRTKNEPVAMHLTFDHSGLLIAEKKTARQIGTTVTVKKLFSNLPVRSKEFHRNIRKEYGK
LISLLNAYALTAKGVRLVCSNTSRKNLKSVVIKTQGSGSLKDSIIQVFGMNMFNCLEPVS
ICISDDCKIEGFLSKSGQGSGRSMGDRQYFFVNGRPVDMPKVSKLVNEIYKGANSKQYPV
AVMNFIIPTRACDVNVTPDKRKVFFSDESMILQSLREGLQQIYSSSNASYIVNGVDDTNE
AGSFEFCSSPEKSNILSEQSPPAGVNLKVSMREHSPEDKTSFRTVNINAQSLQLLEGSVS
SDLENIPTLGVQGTNMVDGVFEANAGQLTSHMDDTAKKDLSGGLTLRHHEDSLKDFTLQV
RRMNKIDGFMESNDGGLTTHMNSIASKNSSSPSTSIGKGNSVSRDCSSHSGYVQSSLNKF
VTVNKRKHESISTVLSEVPVLRNQSLHYQSKNSNLNLPALGLRDQVDDSSKLNENEPRKF
LRAHSILDETENPSSPSGNTSGGKPGEESENHEKAVPSAGTELIDLFHKNPEDVPEKAST
VPTSESLSSALIVDAPVPPSDKKICSTLEFRFEDLLTKRRQRMSRVLYTGYRFLGMKKTR
CYTAATLELSQPQNVEQKVQALDAATRELEKLFKKEDFSRMKVVGQFNLGFIIGKLDEDL
FIVDQHAADEKYNFEHLAQSTIFNQQPLLRPLRLELSPEEEVVASMHMDIIRKNGFILEE
DPHAPPGHHFNLRAVPFSKNITFGVEDVKDLISTLSDSQGECSIIGSYKMDTSDSVCPTR
VRAMLASRACRSSVMVGDPLGRNEMQKIVEHLADLKSPWNCPHGRPTMRHLVDLTTLSKE
PDEDTSC
NT seq 2904 nt   +upstreamnt  +downstreamnt
atggaaggatcgcctcaatctaagtcccctgtaattaagcccattaacaaaggcgtcgtt
cacagaatctgctccggtcaagtcatattagacctctcctccgccgttaaggaactcgtt
gagaacagcctcgacgctggcgccaccagtattgaaatcgctctcaaagagtacggggaa
gaatggtttcaggtcatcgataatggctgtggtatttcacctgctaatttcaaggtcgtg
gcgcttaaacaccatacgtcgaagcttgcggattttccagaccttgaatctctgactacg
tttggatttagaggggaggcattgagttcgctttgcgctttggggaatctgactattgaa
acgagaacgaaaaatgaacccgttgcaatgcatttaacttttgatcattctggtctgttg
atagctgagaagaaaactgcacggcaaattggtacaactgtcactgtcaagaagttgttt
tcgaatctaccagtgcgaagcaaggaatttcatcgcaacatacgcaaggagtatggcaaa
cttatttccttgttgaatgcatatgcacttacggcaaaaggagtcaggttagtctgcagc
aacacaagcagaaagaatttaaaatctgtggttattaaaacgcagggaagtggttccctc
aaagatagcatcatacaagtttttggcatgaacatgtttaactgcttagagcccgtgtct
atatgtatatcagacgactgcaaaattgaagggtttctatctaagtctggacagggtagt
ggccgcagtatgggagacagacaatacttttttgtaaatggtagaccagtggatatgcct
aaagtgagcaagcttgtgaatgaaatatataaaggtgcaaactctaagcagtatcctgta
gccgtaatgaattttatcattccaactagagcatgtgatgtcaatgtgactcctgataaa
agaaaagtatttttttctgatgaaagcatgattttgcaatctttgagggagggtttgcag
cagatatattcctcaagtaatgccagttatattgttaatggagttgacgacactaacgaa
gcaggttcctttgagttttgctcttcacctgaaaaatctaatatcctttcagagcagtca
cctccagctggagtcaatttgaaagtttccatgagggaacattctccagaagataaaacc
tcctttagaactgtcaatatcaacgctcaaagtttgcagttattagaagggtcagtatct
agtgatcttgagaacataccgactttaggagtacaagggacaaacatggtcgatggtgtt
tttgaggctaatgcagggcaattgacaagtcatatggatgatacagctaaaaaggattta
tcaggaggattaacccttagacatcatgaggattcattgaaggacttcaccttacaagta
cgcagaatgaataagattgatggttttatggagtctaacgatgggggtttgacaactcat
atgaacagtatagctagcaagaactcttcatccccttcaacttcaattgggaaaggaaat
tctgtaagtagagattgtagtagtcattcaggctacgttcaatcatcactgaacaaattt
gtaactgtaaataagaggaagcatgaaagcattagtaccgtgttatctgaagtgcctgtc
ttaagaaatcaaagtcttcattaccaatcgaagaacagcaatttgaatctgcctgctttg
ggcttaagagatcaagttgatgattcctccaagttgaatgagaacgagcctagaaagttt
ctcagagcgcatagcatcttggatgaaactgaaaatcctagttctcctagtggcaacact
agtggtggaaaacctggagaggaatctgagaatcatgaaaaagcagtgccttctgctgga
acagaactcattgatttattccacaaaaatcccgaggatgtacctgaaaaagcatctaca
gttccaacatcggagtctctatcctctgctttaattgtagatgctcccgtacctccatct
gataaaaagatatgttctaccttggagtttagatttgaggacttattgacaaagaggcgg
cagaggatgtcaagagtactgtacaccggttacagattccttggcatgaagaaaacaagg
tgttatactgctgcgacacttgagctttctcaaccacagaatgtggagcaaaaagtacaa
gctttagatgctgctaccagagagttggagaaacttttcaaaaaagaagactttagccga
atgaaggtggtcgggcaatttaatcttggattcatcattgggaagttagatgaagattta
tttattgtggatcagcatgctgctgatgagaaatacaattttgagcatctggctcaatca
accatctttaaccagcagcctttgcttcggcctctgagattggagctatctcctgaagaa
gaagtagttgcttcaatgcatatggacataatcaggaaaaatgggtttattttggaagag
gatccacatgctccaccagggcaccattttaatctcagagctgttcccttcagtaaaaac
attacttttggagttgaagatgtcaaagatttgatctctactctttctgatagtcaaggg
gaatgttcgataatcggtagttataaaatggacacatctgattctgtttgccctactaga
gttcgtgcaatgttggcatcacgtgcttgcagatcgtctgtcatggtaggagatccactt
ggacgaaatgaaatgcagaagatagtagagcatttggcagacttgaagtctccgtggaat
tgcccacatggacggccaacaatgcgacatttggtagacctgacaaccctaagcaaagaa
ccggatgaagacacaagctgttga

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