Gossypium raimondii: 105764384
Help
Entry
105764384 CDS
T04129
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105764384
Transcription factors [BR:
gra03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105764384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
105764384
NCBI-ProteinID:
XP_012438382
UniProt:
A0A0D2U4K4
LinkDB
All DBs
Position
12:44692175..44695941
Genome browser
AA seq
560 aa
AA seq
DB search
MATASSSATFFGNSAENENPMIKQQSSAAPTSSTAPTTAPHSKKKRNQPGTPNPDVEVIA
LSPKSLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKKKVYLCPEPTC
VHHEPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCG
TLFSRRDSFITHRAFCDALAQETARHPTNNLTPIGSHHIFGGNHHQMSLGLSQNQPLTSN
MLRLGSGTGVAKFEHLNSPPSNPSSLQNMPAFFMGDAANQGFLPEHQSHHGNGPYINKPL
HGLMQLPDLQGNTNSTAPNSASLFNLGFFPSNSGASSISTGENGGASNSGFLSGNQFNMG
DVQVGSGMASLYSSSSMQHENISPNMSATALLQKAAQMGSTTSNNTCSLLRGLGSSSSSG
VKSDRQVFAPNNFESGGSLRSQMENDSNLQGLMNSLANGNSSIFGQDHSNFGGFTGNGMT
VEHHSNNANFSNVDEAKLHQKLGVRIGESDKLTLDFLGVGEMVGNMGGNGQHGINIGSLN
PDVKSSAQATSQQFGCPKLV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgcttcatcgtcggcaactttcttcggaaacagcgcagaaaatgaaaacccg
atgataaaacaacaatcatccgccgcacctacttcctcaactgctccaaccactgcacct
cactctaagaaaaagagaaatcaacctggaactccaaatccagatgtggaagtgatagca
ctatctcccaagtctttaatggcaaccaacagattcatctgtgaggtatgcaacaaaggg
tttcagagggagcagaatttacagctccatagaagaggacacaatctgccatggaagcta
aagcagaagagcacaaaagaagtgaagaagaaggtttatctttgccctgaacccacatgc
gtccaccatgaaccctcgagggcacttggggaccttacgggcatcaaaaagcattactcg
agaaaacatggggagaagaaatggaagtgtgagaagtgttccaagaggtatgccgtgcaa
tctgattggaaagctcattctaagacttgcggcactagggagtacagatgtgactgtggc
actctcttctcaagacgtgatagtttcatcacccatcgggccttctgcgatgcattggct
caagaaactgcaaggcaccccaccaataacttaaccccaatcggaagccatcatatattt
ggaggtaatcatcatcaaatgagcttaggattatcccagaatcaaccattaacgagcaac
atgttgcggttgggaagcggcactggagtcgcaaagttcgagcacctcaacagtccccca
tccaatccttcttcattgcagaacatgccggcgttcttcatgggggatgcggcgaaccaa
ggttttctcccagaacatcaatctcatcatggaaatggaccatacataaacaaaccctta
catggtcttatgcaacttccggaccttcaaggcaatactaacagtacggcgcccaattcc
gccagtcttttcaatttaggcttcttccccagcaacagtggtgcaagcagcataagtacc
ggcgaaaacggcggagcttcgaattccggatttttaagcggtaatcagtttaacatgggt
gatgtgcaggttggttcggggatggcctctctttatagcagtagttcaatgcaacatgag
aacatttctccaaacatgtcggcaactgcattgcttcaaaaagctgctcaaatgggttca
actacaagcaacaacacttgctcattgctacggggattggggagttcttcgtctagtggg
gtcaaatccgacagacaagtttttgcccctaacaatttcgagagtggtggcagtctaaga
tcacagatggagaatgatagcaatcttcaaggactaatgaactctcttgcaaatggtaac
tcctccattttcggacaagatcatagcaacttcggagggttcaccggaaatgggatgaca
gtggaacatcatagcaataacgccaacttttccaacgttgatgaagctaagttacatcaa
aaacttggggtaagaatcggggagagtgataaattaacattggattttctcggagtgggg
gaaatggtaggcaacatgggtggaaatggtcaacatgggatcaatatcgggtctttgaac
cccgatgtgaagtcatcggctcaagcaacctcacaacaatttggctgcccaaaacttgtc
taa
DBGET
integrated database retrieval system
