Gossypium raimondii: 105764488
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Entry
105764488 CDS
T04129
Name
(RefSeq) vesicle transport v-SNARE 12
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
gra
Gossypium raimondii
Pathway
gra04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
105764488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105764488
Membrane trafficking [BR:
gra04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
105764488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
ETRAMP
RGCC
RIFIN
PLU-1
Fusion_gly
Cation_ATPase_C
Pox_EPC_I2-L1
SNARE
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
105764488
NCBI-ProteinID:
XP_012438535
UniProt:
A0A0D2T2E2
LinkDB
All DBs
Position
12:46108793..46110923
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AA seq
219 aa
AA seq
DB search
MSEVFEGYERQYCELSANLSRKCNSASAITDSEQKKQKFSEINSGIDEADVLIRKMDLEA
RSLQPGVKASLLAKLREYKADLNKLKKEFKRISSPNAHDELLESGIADIHSVSAEQRDRL
SMSVERLNQSSERIKESRRTVLETEELGISILEDLHQQRQTLLHAHNKLYDVDSAIDKSK
KVLTTMSRRITKNKWIVISIIVALVLAIILILYYKISHG
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaggttttcgaaggttatgaacgacagtactgcgaactctctgccaatctttcc
cgaaaatgcaattctgcttctgctattacagattcagaacagaagaaacagaagttttcg
gagatcaattctgggatcgatgaggctgatgtcctgattcggaaaatggacctggaagcg
aggagtttgcaaccaggggttaaggcttcacttcttgctaaattaagggaatacaaagct
gatctgaacaaattgaagaaggaattcaagagaatttcttcacccaatgctcatgatgag
ttgttagaatcagggattgctgatatacactcggtttctgctgagcaaagggatcgattg
tcaatgtcagtggagagactaaatcagtcaagtgagagaattaaggagagtagaagaact
gttctggaaacagaagagctcggtatttcgatacttgaagatttgcatcaacagcgacaa
actcttttacatgcccataacaagctttatgatgtggatagcgccattgacaagagcaag
aaagttttaacaaccatgtcgagaaggattaccaagaacaaatggatcgttatctcgata
atcgtagcacttgtccttgcaatcatcttaatcctgtattacaagatttcacatggctga
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