Gossypium raimondii: 105764766
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Entry
105764766 CDS
T04129
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105764766
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105764766
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105764766
NCBI-ProteinID:
XP_012438973
UniProt:
A0A0D2T3V0
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Position
12:49520852..49522762
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AA seq
404 aa
AA seq
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MPLPSLSLLFLFTSLLIPSPISSSPVQDPELVVEDVHRAINASRRNLGYLSCGTGNPIDD
CWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSSDNDAVNPKPGTLRHAVIQD
EPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGLNIHDC
KQGGNAMVRDSPRHYGWRTISDGDGVSIFGGSHVWVDHNSLSNCNDGLVDAIHGSTAITI
SNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSANPTINSQGNRFTAPNDRFSKEVTKHEDAPESDWKSWNWRSEGDLMVNGAF
FTASGAGASSSYSKASSLGARPSSLVATITTNAGSLNCKKGSRC
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgccactcccttccctttctctcctcttcctcttcacttctctcctaatcccctctccc
atttcctcttcccctgttcaagaccctgaacttgttgtcgaagatgtgcatagggccatc
aatgcgtctaggaggaaccttggatatctatcctgcggcaccggcaaccccattgatgac
tgctggcgatgtgaccctaactgggagaagaaccgccagaggctagcagactgtgcaatt
gggttcggcaagaatgccattggtggaagagatggtaagatttatgttgtcactgactcg
agtgacaatgatgccgtgaaccccaaaccgggaactttacgacatgccgtgattcaagat
gaaccgttgtggatcatttttgcccgggacatgaccatccggttgaaggaggaactaatc
atgaactcgttcaagaccatcgatgggcgtggtgccagtgttcacattgcagggggtcct
tgtataaccattcagtatgtgaccaacattatcattcatggactcaacatccatgactgc
aagcaaggagggaatgctatggtgagggactccccacggcattacggttggcgaaccata
tcggatggggatggtgtgtctatcttcggtggtagccatgtttgggtggatcataactcc
ttgtccaactgcaatgatggtctggttgatgccattcatgggtccaccgcaatcaccatc
tcaaacaactacatgactcaccatgataaagtcatgcttttggggcacagtgattcctat
actcaagacaagaacatgcaagtcactatagcctttaatcactttggtgaagggcttgtt
caaagaatgccaagatgtagacatgggtatttccatgtggttaacaatgactacacccat
tgggaaatgtatgccattggaggaagtgcaaacccaactattaatagccaaggcaacaga
tttacagcaccaaacgatagattcagcaaagaggtgaccaagcatgaagatgcaccagag
agtgactggaagagctggaattggagatcggaaggcgacctgatggtgaacggtgcattt
ttcacggcgtcgggtgccggtgcctcgtcgagctattccaaggcttcgagcttgggtgct
aggccatcttcactggtggccaccataaccactaatgctggttcacttaattgcaagaaa
ggttctcgttgctga
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