Gossypium raimondii: 105764858
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Entry
105764858 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105764858
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gra
Gossypium raimondii
Pathway
gra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105764858
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105764858
03110 Chaperones and folding catalysts [BR:
gra03110
]
105764858
03029 Mitochondrial biogenesis [BR:
gra03029
]
105764858
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105764858
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
105764858
Messenger RNA biogenesis [BR:
gra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
105764858
Chaperones and folding catalysts [BR:
gra03110
]
Heat shock proteins
HSP60 / Chaperonin
105764858
Mitochondrial biogenesis [BR:
gra03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
105764858
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105764858
Exosomal proteins of other body fluids (saliva and urine)
105764858
Exosomal proteins of breast cancer cells
105764858
Exosomal proteins of colorectal cancer cells
105764858
Exosomal proteins of bladder cancer cells
105764858
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Cation_ATPase_N
Motif
Other DBs
NCBI-GeneID:
105764858
NCBI-ProteinID:
XP_052489772
LinkDB
All DBs
Position
7:complement(5069190..5072385)
Genome browser
AA seq
476 aa
AA seq
DB search
MATTFIAMSSVGSFVAPNGLVMDKKLSSSSYRLSSLASISSSSFLSRRNVVLRRSRLPKI
SAAKELHFNNDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYCSPKIVNDGVTVAK
EVELEDPVENIGAKLVRQAAAKTNGLAGDGATTSVVLAQGLIAEGVKSYCNLVTWFTFVH
EYTNAKKGSFANPKGKSHPILQLFDPSPHLPSVSTCCRCIDVGYYKILPSLWLLVLGLLV
DKKITNARDLINILEDAIRSGYPILIIAEDIEQEALETLVVNKLRVPGTPVTLPGAAGDF
AVGLEQLASMTRDHKLSALQQYGGVKGLSDLLKTNLETGIYGDEVDLLNRKTAFGSNTYP
RKKGRSFWRFLWEAWQDLTLIILVVAASVSLGLGIKTESMEKVFKFSTMKLDRNMNHILI
TSLMSTILDMEASVWLLCSCIYVEEGGRQYFQMPRAILALFHGGMNCPNVAKVVLL
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccactttcatagccatgtcatcagttggctcattcgttgcacctaatggtctg
gtcatggataagaagctttcatcttcttcctacagattgtcatctttagcatccatttct
tcatcttcatttcttagtagacgaaatgttgttcttagaagatctcgtctgcccaagatt
tctgcagcaaaagagctacatttcaataatgatgggtcagccataaagaaattacaaact
ggtgtgaacaagcttgctgatttggttggagtcactcttggaccaaaaggcaggaatgtc
gttctagagagcaaatattgctctcccaaaatcgttaatgatggtgtgacagtggctaag
gaggttgagttggaggacccagttgagaacattggggctaagttagtaagacaggcagct
gctaaaactaatggcttggctggtgatggagcaacaacttctgttgttcttgcgcaaggt
ttgattgctgaaggtgtcaagagctattgtaatctagttacttggtttacatttgttcat
gaatatacgaatgcaaaaaaaggaagctttgccaatccaaaagggaagtcccatcctatt
cttcagctctttgatccttctcctcatcttccctctgtttccacttgctgcaggtgcata
gatgttggatactacaagatcctgcctagcctatggctacttgttttgggactgctagtt
gataaaaaaattactaatgcaagagatcttatcaacatcctggaagatgccattaggagc
ggatacccaattttgataattgcggaagacattgaacaggaagctttagaaactctggtt
gtgaacaaacttagagtgccaggtaccccagttacactgccaggtgctgctggtgatttt
gcagttggactagaacaacttgcttcgatgacccgggatcataaattatcagctcttcaa
caatatggtggggttaaggggttgtctgatctgttgaaaacaaatttagagacgggaatt
tacggggatgaggttgatttgttaaaccgcaagactgcatttggatcaaatacatatcca
cggaaaaagggacggagtttctggaggtttctttgggaggcatggcaagatttaaccctt
atcatattggttgtagctgcttctgtgtctttggggttgggaataaagacagagagcatg
gagaaggtcttcaagttctccactatgaagttggacagaaatatgaaccacattttgatt
acttcgttgatgagtacaatactagacatggaggccagcgtatggctactatgctcatgt
atttacgttgaagagggggggagacaatatttccaaatgccaagggcaatattagcgctg
ttccatggtgggatgaattgtccgaatgtggcaaaggtggtcttgctgtga
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