Gossypium raimondii: 105764888
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Entry
105764888 CDS
T04129
Name
(RefSeq) structural maintenance of chromosomes protein 6A
KO
K22804
structural maintenance of chromosomes protein 6
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gra03400
]
105764888
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
105764888
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
SbcC_Walker_B
ACBP4_C
Sipho_Gp157
SMC_hinge
AAA_21
Nuf2_DHR10-like
ABC_tran
MC7
DUF948
Motif
Other DBs
NCBI-GeneID:
105764888
NCBI-ProteinID:
XP_012439131
UniProt:
A0A0D2TA84
LinkDB
All DBs
Position
12:50843052..50857218
Genome browser
AA seq
1058 aa
AA seq
DB search
MSSSRVFSGQMYGAQRSGAGTIRRIRLENFMCHNSLEIELGEWVNFITGQNGSGKSAILT
ALCIAFGCRARETQRASKLKEFIKTGCSYATVQVDIKNEGVDSFKPEIFGDTIIIERRIS
DTTSSTVLKDRQGRKVASRKEDLRELVEHFNIDVENPCVIMSQDKSREFLHSGNDRDKFK
FFFKATLLQQVDELLQSIIKQLKDACALVDELEKLIRPAQLELSELQEKIENIKRVEQIS
QEVQLLRKKLAWSLVYDEDKRLQEQSKNIETLKKRIPTCQAKIDSTLDKLEKLLERLSKK
KVQVASLVEKTSEVKRKKDELWDALCSARKEKLELEEEHRRGTKQIRKMRNDVRRLEEQA
RDIQDKHIRNTQAEESEIEEQIKELEYAVDNVQSLLSSLKDEENTLSEQISAEMDAMKKI
NDEINYYERKQREVHHQICELRLHQTNKVTAFGGDGVLRLLREIERHHKAFSMPPIGPIG
AHVTLVNGDTWVPAVERAIGKMLNAFIVTNSEDACALRKCAREARYNFFPIVIQRFSRPR
LIIPNHSLPQTSHPTTLSVLHSDNPTIYNVLVDVCKAERQVLVKDYNMGRAVAFDQRIPN
MLEVFTLDGFKMFSRGSVQTVLPINKNLKIGRLRGSFGDQVKEFESHVSNIQQDIDQCKS
RKRELEKKVQDFNRKLDNKKKRRLDVEREFMAKRMKLQDMQKSHAVDASLLPESTTNELL
QEISDGKMVINKKEALLETLKDRINEAEEKARTLKLSFEDLGESTKGEVEAFQKAEEELT
EIEKEIHNAEANKLHYENIMNNKVLPQIKEAEAKYLELEKDRKESYKKASVICPESDIEA
LGDRDETTTEQLDAKLKRLNQRLMHESQQYSESIDDLRMLHQEKERRILRKLHTYKAFRE
RLDACQKALDLRWKKFQRNASLLRRELTWQFNGHLGKKGISGQINVSYEEKTLSVEVKMP
QDASSTIVRDTRGLSGGERSFSTLCFALALHDMTEAPFRAMDEFDVFMDAVSRKISLDTL
VEFALAQGSQWIFITPHDISNVKNGERIKKQQMAAPRS
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgagtagttctagggttttttccggtcagatgtatggagctcaacgatccggggcgggt
accattaggaggatccggttagagaacttcatgtgccacaatagtctcgaaatcgaactc
ggcgagtgggttaatttcatcaccggtcaaaacggaagcgggaagagcgcgatactgacc
gctttatgtatcgcgtttggctgccgcgctagagaaactcagagagcgtctaagttgaag
gaattcataaaaactggttgcagttatgctactgttcaagtggatatcaaaaacgaagga
gttgattcttttaagccagaaatttttggtgataccataattattgaacgcaggatttct
gacactacgagttccactgttttgaaagatcgacaaggtagaaaagttgctagccgcaaa
gaggaccttcgtgagctggttgaacatttcaatattgatgtcgagaatccgtgtgttatt
atgagtcaagacaaaagcagggagtttttgcactctgggaatgacagagataaattcaag
ttctttttcaaggctacgcttcttcaacaagttgatgagcttttacaaagtattattaaa
caattgaaggatgcatgtgctcttgtagatgagttggaaaaattgataagacctgcacag
cttgaattgagtgaactgcaagaaaagattgaaaacataaagcgtgtagaacagatttca
caggaggtgcagctgttaaggaaaaagcttgcttggtcattggtgtacgatgaagataag
cgattacaagagcaatcaaagaacattgaaacactgaaaaagcgcattcccacttgccaa
gctaaaattgattcaacattagataaattggagaagttgttggaacgcctttcgaagaag
aaagttcaagttgcatctttggtggagaaaacatctgaagtgaaaagaaagaaagatgaa
ttgtgggacgctctttgctcggcaaggaaagaaaagcttgagcttgaagaagagcatcgc
cgcggcactaagcaaattcgcaagatgaggaatgatgttaggaggcttgaagagcaagcc
cgtgatattcaggataaacatattagaaatacacaggctgaagaatcagaaatagaagag
cagattaaggaactggaatatgctgttgataatgtccagtcattgctctctagtttgaag
gatgaggagaatactttatcagaacagatttcagcagaaatggatgcaatgaagaagatt
aatgatgagattaattactacgaaagaaagcagcgtgaagttcatcatcaaatttgtgag
ctccgtctacatcaaaccaacaaggtcactgcctttggtggtgacggagtgctacgtctt
ctacgtgaaattgagaggcatcacaaggcatttagcatgccaccaattggtccaattggt
gctcatgtgacattggtcaatggtgatacatgggttcctgctgttgaacgagctattggg
aagatgctaaatgcattcattgttacaaattctgaggatgcttgtgctcttagaaaatgt
gcaagggaggcaagatataacttctttccaattgtcatacagaggttttcaagaccaagg
ttgataataccaaatcattcactcccccagacgagccacccaactactctatctgtttta
cattcagataatcctaccatctacaatgtcttggtagatgtgtgtaaagctgagaggcaa
gttcttgtcaaagattacaatatgggaagagctgtcgcatttgatcaaagaataccgaat
atgttggaggtttttaccctagatgggtttaaaatgttttcacggggttcagtccagaca
gttcttcccataaacaaaaatcttaaaattggccgtcttcggggttcttttggtgatcaa
gttaaggagtttgaaagtcatgtgtcaaatattcaacaagatattgatcagtgcaaaagt
aggaagagggagctagagaaaaaggttcaggattttaacaggaagctagataataagaag
aaaaggcgcttggatgtggaacgagagttcatggctaagagaatgaaactgcaggatatg
cagaagtcacatgctgttgatgctagtctgttgcctgagtcaactactaatgaacttctt
caagaaatttcagatggtaaaatggtgatcaacaagaaggaagcattgctagaaacactt
aaagataggatcaatgaagcagaagaaaaggccagaactcttaagttatcatttgaggat
ttaggggagtcaacaaagggggaggttgaagcctttcagaaagcagaggaggagttaaca
gagatagagaaagaaatacacaatgcagaagcgaataagctccattatgaaaatattatg
aacaacaaggttcttcctcaaatcaaggaggcggaggcaaaatatctggaacttgaaaag
gatcgtaaggagagctataaaaaggcttctgttatttgccctgagagtgatattgaagct
ttaggagatagggatgaaaccacaactgagcaactggatgccaagctgaagagactgaat
cagagacttatgcatgagagccaacaatattcggaatcgattgatgaccttaggatgttg
catcaggagaaagagcgtagaattttgaggaaactgcatacttataaagcttttcgagaa
agattagatgcttgtcaaaaagctctcgacttacgttggaaaaaatttcaacgtaacgca
tcacttctgagacgcgagttgacttggcaatttaatggccatttgggaaagaaaggtatc
agtggacaaattaatgttagttatgaagaaaagaccctttcagtagaggttaaaatgcct
caagatgcatcaagcaccatcgttcgtgatacaagagggctctcaggaggagagcggtcc
ttctcaacattatgttttgcgttggctcttcatgatatgactgaagccccatttcgagct
atggatgagtttgatgtgttcatggatgctgttagccgaaaaatcagcctggacacgtta
gtcgagtttgcattggctcaaggatcccaatggatatttatcacacctcatgatatcagc
aatgtgaagaatggagagaggataaagaaacagcagatggcagctcctcgctcatga
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