Gossypium raimondii: 105765179
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Entry
105765179 CDS
T04129
Name
(RefSeq) protein FIZZY-RELATED 2
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
gra
Gossypium raimondii
Pathway
gra04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105765179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105765179
Ubiquitin system [BR:
gra04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
105765179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR55
Beta-prop_Aladin
Beta-prop_IFT140_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
eIF2A
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_RIG_1st
Beta-prop_DCAF4
Beta-prop_HPS5
NBCH_WD40
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
Peptidase_M10_C
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_VPS8
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
105765179
NCBI-ProteinID:
XP_012439599
UniProt:
A0A0D2TBY9
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All DBs
Position
12:53413394..53417811
Genome browser
AA seq
484 aa
AA seq
DB search
MDDPTTVSNQRNQSAPETPRLNLPARMSDSSVYLENLPSRTMHINRLINSNYNGSPSRTI
YSDRFIPSRSGSNFALFDISNSPTSAEGKEDGSGTYNSLLRAALFGPYTPDKKDSLGSPA
CRNIFRYKTETKRSLHSFSPFGLDESVPGIIHSPVKAPRKVPRSPYKVLDAPALQDDFYL
NLVDWSSNNVLAVGLGNCVYLWNACSSKVTKLCDLGIDDSVCSVGWAQRGTHLAVGTSNG
KVQIWDASRCRRIRTMEGHRLRVGALAWSSSLLSSGSRDKSILQRDIRVQDDFASKLSGH
KSEVCGLKWSYDNRELASGGNDNKLFVWNQHSTQPVLKYCDHTAAVKAIAWSPHLHGLLA
SGGGTADRCIRFWNTTTNAHLSCMDTGSQVCNLVWSKNVNELVSTHGYSQNQIIVWRYPT
MSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNVFPSPKSQNTDSEIGASSLGR
TTIR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcctactactgtaagtaatcaacgtaaccaatcagctccggaaactccccgt
ctcaacctcccggccagaatgtccgactcttccgtctatctagaaaaccttccgtctcgg
acaatgcacatcaaccgtttgatcaattccaactacaacggctctccctcgcgcacaatt
tactccgataggttcatccccagcagatcaggctccaacttcgcgcttttcgacatctca
aactctccgacgtcagctgaaggaaaagaagatggttctggtacttataacagcctttta
cgcgctgccctttttggtccatatacgccggacaagaaggattcattgggatctccggct
tgccgtaatattttccggtacaaaactgaaactaaacggtcactacactcgttttcacct
ttcggccttgatgagtcggttccggggattatccatagccccgttaaagctcccaggaag
gttcccaggtcaccttacaaggttctggatgcacctgcgttacaagatgatttttatttg
aatttggtggattggtcatcgaataatgtgttggcggtggggttggggaattgtgtttat
ttgtggaatgcttgtagtagtaaggttactaaattatgtgatttggggattgatgatagt
gtttgttcggttggttgggctcaacgtggaactcatctggcggttgggactagtaacggc
aaagttcagatttgggatgcatctcgctgcaggaggataagaacaatggaggggcatcga
ttacgtgttggggccttagcttggagctcttccctgttatcttctggtagtcgtgataag
agcattcttcaaagagatatacgtgtgcaggatgattttgctagtaaactctctggtcac
aagtcagaggtttgtgggctgaagtggtcatatgacaaccgtgaactagcatcaggcgga
aatgacaacaaactttttgtttggaatcaacattccacccaacctgtccttaaatactgt
gaccatactgctgctgtaaaggcaattgcatggtctccacatctgcatggccttcttgca
tctgggggtggtacagctgatcgatgtattcgattctggaatacaaccacaaacgcacac
ttgagctgcatggatactggcagtcaggtatgcaaccttgtgtggtctaagaatgttaat
gaactcgtcagcactcatggatactcccaaaaccagataattgtttggagataccctacg
atgtcaaagttggctactcttacgggacacacatacagagttctttatcttgcaatctca
cctgatggacagaccatagttactggagctggagatgagacgctaaggttttggaacgtg
ttcccatcccctaaatctcagaacactgatagtgaaataggagcatcatctttgggaaga
accacaattcggtga
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