Gossypium raimondii: 105765228
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Entry
105765228 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105765228 isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105765228
Transcription machinery [BR:
gra03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
105765228
TFIIIC, fungi type
105765228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_14
TPR_8
TPR_1
TPR_17
TPR_7
TPR_11
TPR_16
TPR_12
TPR_CcmH_CycH
TPR_9
TPR_6
TPR_Slam
ANAPC3
ARM_TT21
ARM_TT21_4th
Alkyl_sulf_dimr
DUF7017
NatA_aux_su
ARM_TT21_5th
TPR_20
TPR_15
RPN7
HAT_PRP39_C
TPR_21
HrpB1_HrpK
BCDHK_Adom3
Suf
Motif
Other DBs
NCBI-GeneID:
105765228
NCBI-ProteinID:
XP_012439671
UniProt:
A0A0D2Q1A6
LinkDB
All DBs
Position
12:complement(53756280..53772447)
Genome browser
AA seq
856 aa
AA seq
DB search
MSGSGNLPLDYEALAEKKRKALADMQGSEGSSKKARKEDISEGIMDEIMQTLNCGRRRKS
SKKRGRRKGRGNKLSPQIQRIVGDATLHYGNGRFKEAITVLKEGVQLEPKFPHLYHMLGL
SYKALGDNKRAFQFYIIAGLLKPKDPDLWKLLFTWSIEQENVSLTCHCLSKAIMADPTDI
SLRYLQASLYDELGDYQKAAESYEQIQQISPDNVEALKSGAKLYQKCGQIERSFAILEGY
LEGHQDEADLSVINLLVSMLMQNNAYERALQQIEQAHAIYYSGKELPINLKTKSGICHIH
LGDIEKAEVFCSVLQSMAHDHADLVTEVADTFMTLGHVNSALKYYNMLENDDGIDDDHLH
HKIAQCYISTGEKVLAIKFLRKALERLENNVDARLNLASLLIEDSKEDEAISLLSPPQSF
DLQNINKNSDTSKSWWLNGKIKLKLCNIYRAKGMMEDFVNTILPLVQESLYIESLGIKIK
VRRRLRDSDLFERVKKVDDRQTDGVFCGSRPMVTAADRLKASRARKLLQKKAALKEEKKA
AALAAGLDWHSDDANDESEEEHFKEPPLVNLLKDEEQQDLIIDLCKALESLERYYEALDI
IKLVLKSGHNFFPVEKQQQLRSLGAQMAYYTMDSKHGFDCIKHIVQQHPYSITAWNCYYK
VLPRSGKCYSRHCKFLRFFRSKHKDCIPPIVISGHQFTVLSHHQDAAREYLEAYKLLPEN
PLINLCVGTALINLTLGLRLQNKHQCIAQGLAFLYNNLRLCENSQEALYNIGRACHHVGL
VTLAVSYYEKVLAMKEKDHPIPKLPNENWDHAVENHKKDGYCDLRREAAFNLHLIYRKCG
AMDLARQVLKDHCTFD
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttccggcaaccttcctcttgactatgaagctctggcggagaagaagcgcaaa
gcacttgccgatatgcagggcagtgaaggatcatcaaagaaggctagaaaagaggatatt
tcggaagggattatggatgaaataatgcaaactttgaactgtggtcgtcggagaaaatca
agcaagaaacgaggtaggcgaaagggaagagggaataaactgagcccccaaattcagaga
attgttggagatgctacacttcactatggaaatggtcgtttcaaagaggccataactgtt
ctgaaggaaggtgttcaacttgaaccaaaatttcctcatttatatcatatgctcgggctt
tcttataaagcccttggtgataataaaagagcttttcaattctacatcatagctggactt
cttaagccaaaagatcctgatctgtggaaactgctttttacctggtccatagagcaagag
aatgttagtctgacctgccattgcctttctaaagcaataatggcagatcctacagatatt
agtttaagatatcttcaagcatcactttatgatgagctcggtgattaccagaaagcagcc
gagtcatatgaacaaattcagcaaatctctcctgacaatgttgaagcattgaaaagtggg
gctaagttataccaaaaatgtggtcagattgaacgatcttttgctattttggagggctat
cttgagggtcatcaagatgaggctgatttgagtgttattaatcttcttgtttctatgtta
atgcaaaataatgcatatgaaagggctcttcagcaaattgagcaagcccatgctatctac
tattcaggaaaagaactgcctatcaacttgaaaactaaatcaggaatttgccacattcac
ctgggagatatagagaaagcagaggtgttctgcagtgttttgcaatccatggcacatgat
catgctgacttggttactgaggttgcagatacatttatgactcttgggcatgttaactct
gcattgaagtattacaatatgttggagaatgatgatggaattgatgatgaccatttacat
cacaaaattgctcagtgttacatatccacgggagaaaaagtgctagcaattaagttcctt
cgaaaagctctggaacgactagagaacaacgtcgatgctcgtttaaatttggcttccctg
cttattgaagattctaaagaagatgaagccatttctttgctttctcctccccaaagtttt
gatttacagaatattaacaagaattctgatacatctaaatcgtggtggctcaatgggaaa
ataaaattgaagctatgcaacatttatagagctaaagggatgatggaggattttgtcaat
accattcttccgttggtacaagagtccctttatattgaatctcttgggataaagataaaa
gttaggcgccgcctaagagatagtgatctatttgaaagagtcaaaaaagttgatgatcgg
caaactgatggtgtattttgtgggtcaagaccaatggtaactgcagcagataggttgaaa
gcttccagagcaagaaagctgctacaaaagaaagcagctttgaaggaagaaaagaaagct
gctgcacttgctgccggacttgattggcatagtgatgatgccaatgatgaatctgaggaa
gaacattttaaagaaccacctctggttaatcttctaaaagatgaggagcagcaagacctt
atcatagacttatgcaaggcattggaatctttggaaaggtattatgaagcattggatatt
atcaaacttgtattaaaatcaggtcataactttttccctgttgagaagcagcagcagctt
cgatcacttggagcacaaatggcatactacaccatggattccaagcatgggtttgactgc
ataaagcacattgttcagcagcacccttacagtattactgcttggaactgctattacaaa
gtacttccaagatcgggaaaatgttattcaaggcattgtaagtttttacgttttttccgt
agcaaacacaaagattgcataccacctattgtcatttctggccatcagtttaccgtgctt
agtcatcaccaagatgctgctcgagaataccttgaagcttataagttgttgccagagaat
cctttaattaatttgtgtgttgggactgcattgatcaatttaacccttggacttagactc
caaaacaagcatcagtgtattgcacaaggtttagctttcctctacaacaaccttcgtctt
tgtgagaacagccaggaagcactgtataatatcggacgggcatgtcatcatgtcggactg
gtgaccctggcagtttcatactatgaaaaggtgttagcgatgaaggagaaggatcatcca
atcccaaaactccccaatgagaactgggatcatgcggtagagaaccacaaaaaagatggg
tattgtgaccttcgcagggaggcagctttcaatttgcatttaatctatagaaaatgtgga
gcaatggatcttgctcgccaagtcttgaaagatcattgcacctttgattga
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