Gossypium raimondii: 105765242
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Entry
105765242 CDS
T04129
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105765242
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gra01009
]
105765242
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105765242
Protein phosphatases and associated proteins [BR:
gra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105765242
Spliceosome [BR:
gra03041
]
Common components
Common spliceosomal components
SR proteins
105765242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
105765242
NCBI-ProteinID:
XP_012439698
UniProt:
A0A0D2T6B9
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Position
12:complement(53849077..53851801)
Genome browser
AA seq
197 aa
AA seq
DB search
MSYSREGRSVSPGRRRQPRSGRSRSRSRSRESQDASNPGNNLYVTGLSTRVTAVDLEKYF
SNEGKVLECHLVTDPHTKESRGFAFVTMETVEGAERCIKYLNRSVLEGRLITVEKAKRSR
GRTPTPGRYQGVRDRRGQGHRRSRSYSPRQNDRDYHSRGRRGRPRSRSPYGRRRDDPDLH
RRRRERSLSGDGSGHRR
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtcatattcaagggaaggaaggtcggtttctccgggaagaagacgtcagcctaggtct
ggtaggagtcgctccaggtctaggagccgtgaatctcaggatgcatccaatccaggaaat
aacttatatgttactgggttatccacaagagttactgctgttgatctcgagaagtatttc
agcaatgaaggaaaggttttggagtgccatctagttactgatccacacaccaaagaatct
cgtggatttgctttcgtgaccatggaaactgttgagggtgcagagcgctgcatcaagtat
ctgaatcgttcagtgcttgaaggtcgattaatcactgtggaaaaggcaaaaaggtcccga
ggaagaacaccgacacctgggaggtatcaaggtgtgcgagatagaagaggacaaggccac
agacggtctcgtagctattcacctcgacaaaacgacagagattatcattcaaggggtaga
cgagggagaccccgttctcgttctccatatggtaggagaagagatgatcctgacttacat
aggaggcgcagagagcgctccttgtctggtgatggcagtggtcatcgtagatga
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