KEGG   Gossypium raimondii: 105765283
Entry
105765283         CDS       T04129                                 
Name
(RefSeq) protein SPA1-RELATED 2 isoform X1
  KO
K16240  protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
gra  Gossypium raimondii
Pathway
gra04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:gra00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    105765283
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gra04121]
    105765283
Ubiquitin system [BR:gra04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    105765283
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_EIPR1 EIF3I WDR55 Beta-prop_RIG_2nd Pkinase Beta-prop_DCAF4 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 PK_Tyr_Ser-Thr Beta-prop_WDR35_TULP_N Beta-prop_WDR90_POC16_2nd WD40_like Beta-prop_DCAF12 Beta-prop_SCAP
Other DBs
NCBI-GeneID: 105765283
NCBI-ProteinID: XP_012439747
UniProt: A0A0D2Q1L6
LinkDB
Position
12:complement(54241963..54248937)
AA seq 1054 aa
MDEEIIEEVAPIDAAEGAHLQGKEVEYLVKSDNCNVLVSQEMVIPVEVNASFRVLGDVLE
GKNALEHGCTSPCTYNDENDMVEELTLRNYNGSNIPVVGTSNYREKTQMRQSRWQHLYQL
GSGSGSGGSCGKMDNSQAMPSMPLDARCASFPEILGHKPLSDGQTEAAAQLIGGENNEVS
GSQQSHGGIKTKILSKSGFSEFFVKTTLKGKGIICRGPSHDASRVDLRHRNNTKSTGQTM
VAPIPPVKPAGSPVVASNTSLILDNRAVVTSPNGIIVPRAGERDHDGINLREWLKVQSHK
ANKAECLYIFRQIVDLVDYSHSQGAILHDLRPSCFKLLQANQVKYIGSGVQKGLLDTMWD
KDSSPSENFMTRRRPMKQGMISSIGLCAKKQKINENTNLTRWPLFHSRANLKNETINTQF
SHNGSSEHCPNTQFSNFGSSHSSNSAQHQSVSVNEQLEEKWYASPEDINEAVCTILSNIY
SLGVLLFELLCQFESERGHAAAMLDLRHRIFPPTFLSENLKEAGFCLRLLHPEPSLRPTT
RDILQSEVLNGFQEVFAEELSSSINQDDTESELLLHFLGLSKEQKQKHASKLMEDIACLE
ADIKEVEKRRHFSRKPFTYSSINARECRHHSKEPPISEMHLSLYPFSSDNEMRLMRNINQ
LESAYFSMRSRVPFHETDSMRRPDKDLLKNRDNGHLTQNNEEIPNPPDCLGAFFDGLCKY
ARYSKFEVRGIMRSGEFNNSANVICSLSFDRDEDYFAAAGVSKKIKIFEFNALFNDSVDV
HYPVIEMLNKSKLSCVCWNNYIKNYLASTDYDGLVKLWDASTGQAISHYIEHEKRAWSVD
FSQVYPTKLASGSDDCSVKLWSINEMNCLGTIRNIANVCCVQFSAHSPHLLAFGSADYKT
YCYDLRNARAPWCVLDGHDKAVSYVKFLDSETVVTASTDNTLKLWDLNKTSSGGLSSNAC
SLTFSGHTNEKNFVGLSVVDGFIACGSETNEVYAYYRSLPMPITSHKFGSIDPISGKDTD
DDNGLFVSSVCWRGKSDMVVAANSSGCIKVLQMV
NT seq 3165 nt   +upstreamnt  +downstreamnt
atggatgaagaaataattgaagaagtagctccaatagatgcagctgagggggctcacctt
cagggcaaagaggttgagtatttggtcaaatctgacaactgcaacgtgttggtgtcccaa
gaaatggtgataccagttgaggttaatgcttcattccgtgttcttggtgatgtattggaa
ggaaagaatgcgttggaacatgggtgtactagcccttgtacttataatgatgaaaatgac
atggttgaagagttaactttgagaaactataatggctctaacatacccgtagttggtaca
tcaaattatagagaaaaaacgcagatgaggcagagccgttggcaacatctttatcagttg
ggaagcggatcaggaagtgggggttcatgcggcaagatggacaacagtcaggcaatgcca
agtatgccactggatgcaaggtgtgcatcttttcctgaaattttgggtcacaaacctttg
agtgatgggcagactgaagctgcagcacaattgattggtggtgaaaataatgaggtttct
ggcagtcagcaatctcatggaggtatcaagacaaagattttatccaaatcaggattttct
gaattttttgttaaaactacattgaaaggtaagggcattatatgtagaggtccttctcat
gatgcctccagagttgaccttagacatcgaaataacacaaaatctaccgggcaaactatg
gtggctcctattcctcctgtgaaacctgctggaagccctgtggtggcttctaatacttca
ctaatcttggataatagagctgttgtgacttctcccaatgggatcatagtgccaagggct
ggtgagcgtgatcatgatgggataaacttgagagaatggctgaaagttcagtctcataaa
gcaaacaaagctgagtgcttgtatatatttaggcaaattgtggatctggttgattattct
cattctcaaggagctatcttgcatgacttgcgcccttcttgcttcaagttgttgcaagct
aatcaggttaaatatattggttcaggtgttcagaaagggcttctagataccatgtgggat
aaagattcctctccttccgagaactttatgactaggagaaggccaatgaagcaggggatg
atttcctcaattggtctttgtgctaaaaagcaaaagatcaatgagaacacaaacttgact
aggtggcctctgtttcattctagagctaacctcaaaaatgaaaccataaacacccaattt
tctcacaatggatctagcgaacattgtccaaatacacaatttagcaattttgggagctct
cattcttctaattcagctcagcatcagtcagtctctgtgaatgagcagttggaagagaag
tggtatgctagtccagaggatatcaatgaagctgtttgcacaattttatctaatatatac
agtttgggtgtgctgctttttgagttgctttgtcaatttgaatctgagagaggacatgct
gctgcaatgttggatctacgccataggatttttcctccaacttttctgtcagaaaatctc
aaggaagctggattttgtcttagactacttcacccagaaccttctttgcgcccaacaacc
agggatatcctacaatctgaagtacttaatggattccaggaagtatttgcagaagaattg
tcgtcatccattaaccaagatgatactgaatcagaattattattgcatttccttggttta
tcaaaagagcaaaagcagaagcatgcctcaaaactaatggaagatattgcttgcttggaa
gcagatattaaagaggttgagaaaagaaggcacttttctagaaaaccttttacttattct
tccatcaatgcgagggaatgtaggcaccatagtaaagaacctccaatctcggagatgcat
ttaagtttatacccgttttccagtgacaatgaaatgaggttaatgagaaatatcaatcag
cttgaatctgcttatttctctatgaggtcaagagtcccttttcatgagaccgattctatg
agacggccagataaggatttactgaaaaatcgtgacaatgggcatttgacacaaaacaat
gaagaaataccgaatcctcctgattgccttggagcattctttgatggtttgtgtaagtat
gctcgatatagcaagtttgaagtccgtgggataatgagaagtggggagttcaacaactct
gcgaatgtaatctgttctttaagttttgatcgtgacgaggattattttgctgctgctggt
gtctctaagaaaataaagatattcgaatttaatgcactttttaatgactctgttgatgtt
cattatccagtcattgagatgttaaacaaatcaaagcttagctgtgtttgctggaataac
tatatcaagaactatctggcttcaactgactacgacggtctggttaagttatgggatgca
agcaccggtcaagctatctctcattacattgaacatgaaaagagagcctggtctgttgac
ttttctcaagtgtatccaacaaaattggctagtggcagtgatgactgttccgtgaaacta
tggagcattaacgagatgaactgcttgggaaccatcaggaacattgcaaatgtctgctgt
gttcagttttctgctcattcccctcatttactggcatttggatctgcggattacaaaaca
tattgctatgatcttcggaatgctagagccccatggtgtgttcttgatggtcatgataaa
gccgtgagctatgtgaagttcctggactcggaaactgtagttactgcttccactgacaac
acattaaagctttgggatctcaataaaactagcagtgggggcctgtcctctaatgcttgc
agcttaacattttctggacatacaaatgagaagaattttgttggattatccgttgttgat
ggttttatagcatgtggctcagaaacaaatgaggtttatgcatactatagatcactgcct
atgccaataacttctcataaatttgggtccattgatcccatttctgggaaagacacggat
gatgacaacgggctgtttgtatcaagtgtttgctggagagggaaatcagacatggttgtt
gctgcaaattctagtggatgtattaaagtattgcagatggtttaa

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