Gossypium raimondii: 105765352
Help
Entry
105765352 CDS
T04129
Name
(RefSeq) transcription factor MYC2
KO
K13422
transcription factor MYC2
Organism
gra
Gossypium raimondii
Pathway
gra04016
MAPK signaling pathway - plant
gra04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
105765352
04075 Plant hormone signal transduction
105765352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105765352
Transcription factors [BR:
gra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
105765352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH-MYC_N
HLH
bHLH-TF_ACT-like_plant
bHLH_INO4
DUF5547
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
105765352
NCBI-ProteinID:
XP_012439845
UniProt:
A0A0D2Q1W8
LinkDB
All DBs
Position
12:54673125..54674936
Genome browser
AA seq
475 aa
AA seq
DB search
MSSSSSSSLITLGQDASPTLQQRLHFIVQSRPEWWVYSIFWQASRDVDGRVVLSWGDGYF
RGTRDGTGKSINRLSPSKLGSSFERKRSGKDQVQAYFNEVMDVDRMVDGDVTDYEWYYTV
SMTRSFAVGDGILGKAFGSGSHIWLGGDHELQLYQCERVREARMRGIQTLVCLPTSFGVV
ELGSSDIIMEDWGTLQLTKSIFSSGINNSLGSNQPAHDSQPQISTPSIPFVDFGMVSGDQ
KERILEEKQQVEPKKETTGLGRSSSESDGDFASADTEFNAGGRSKKRGRKPGNGKESPIN
HVEAERQRRERLNHRFYALRSVVPNVSKMDKASLLSDAVAYIKELRSKIDKLEAQLLVQS
EKSKLNPINVFENQTTKSAFDNTMKQSSTYWPKTVEVDVKIVGSEAMIRVRSPDIDHPAA
RLMDALRDLELPVHHASVSNVNDLMLQDVVVRVPTGIFITDEMLSTAILQRCTLN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctcttcttcgtcttctcttattaccttaggtcaagatgcctcacctactttg
caacaacgcctccatttcatcgtccaaagtaggcctgaatggtgggtatactccattttc
tggcaagcttcaagggatgttgatggtcgcgttgttttgtcatggggcgatggctatttt
cgagggacccgagatggtacgggaaaatccatcaataggctgagcccttccaaattgggg
tccagtttcgagaggaaaaggtcgggaaaagatcaggtgcaagcttattttaatgaagtg
atggacgtggaccgaatggtagatggcgatgtgactgattatgagtggtactataccgta
tccatgacccgatcattcgctgtgggtgacgggattcttgggaaggctttcggatcaggc
tcccatatttggttgggtggagaccatgaactccaattgtaccaatgtgagcgtgttaga
gaagctcgaatgcgagggattcaaacattagtttgtcttcctacatccttcggggttgtc
gaattgggatcttctgatatcatcatggaagactggggcacccttcaactcactaaatcg
atattcagttctgggatcaacaacagcctgggttcaaatcaacctgcccatgattcccaa
ccccaaatctcaaccccaagtattccttttgttgattttggaatggtttcaggtgatcaa
aaggagcggattcttgaagagaaacaacaagtcgagcccaagaaagaaaccacaggttta
ggccgttcgtcatcggaatctgatggggatttcgcctctgcagacaccgagttcaatgcc
ggcggccggtcgaaaaagagaggtagaaaaccagggaatgggaaagagtcccctataaac
cacgttgaagcagaaaggcaacgacgtgagagactgaaccatcgtttctacgcacttcgt
tccgtggttccaaacgtatccaagatggacaaagcctcattactttcggatgcagtagcc
tacatcaaggaactaagatcaaaaatcgataaactagaggctcaactcctagtacaatct
gaaaaatccaagttgaaccccataaatgttttcgaaaaccaaactaccaaatccgcattc
gacaataccatgaaacaatcctctacttattggccaaagacagtggaagttgatgtgaag
atagtaggatccgaagccatgattcgggttcgaagtccagatatcgatcatccagctgca
cgattgatggatgcacttcgagacctagagctaccagttcaccatgccagtgtatcaaac
gtcaatgatcttatgctacaagatgttgttgtcagagtccctactggaatattcataacc
gacgagatgcttagtactgcaatccttcagagatgcacgttgaattag
DBGET
integrated database retrieval system