Gossypium raimondii: 105765391
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Entry
105765391 CDS
T04129
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
gra
Gossypium raimondii
Pathway
gra04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
105765391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105765391
03029 Mitochondrial biogenesis [BR:
gra03029
]
105765391
Membrane trafficking [BR:
gra04131
]
Autophagy
Autophagosome formation proteins
ULK complex
105765391
Atg1 complex
105765391
Mitochondrial biogenesis [BR:
gra03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
105765391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
105765391
NCBI-ProteinID:
XP_012439913
UniProt:
A0A0D2TD18
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Position
12:complement(54938123..54941521)
Genome browser
AA seq
622 aa
AA seq
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MEMDRESGKLEQIVSQFRSKILHVILDSRVPSLHHHHHQQQQESLSHSRVRKTDKWFNLV
LGDRPPALENLNFSLRNLFDPMVIDIILVHRGSCSSSVDNLYSPSAPAAGPADETVIERW
VVQYDCPRFIATPSGADASVSYKKIYKKSIILLRSLYTQMRLLPAYRIFKQLSSLSQTYN
FDLVYKVSSFSHPFSREEESGMKEYIFAPVEALSGCLSVSVTYRATLSDFNLEPLVSLPP
KIITDYVGSPTTDPMRSFPSSDKGAHATSFPLRGARPPSSSPFQRPHSWSSGFHRGFPST
KTQSLAGSPPVYRTSPKPYDIASPPTDLYGNRIQNQRVSTLQQVTAYDEYKSSPPFSPSA
SPSTPSYLSGTNPLLTRHCSETAPVTIPLPLTGRSTRYLSPNSSDPSRHSLPPLSPRSSK
HDASSQESPSGIRSYRKIEALRAGESPSGLSNNYSAQKVVRDSKDDSGRFSALLSSSGSP
RIGFSRSSSRLSFQDDMDDCEFSCPFDVDDVDVSDSSSQNTEGKKASEFTAQSNLVGKKS
QDAAVGILVHMLRTAPPLRQDSSCYSTHSLRTEYEGGVSIASGFFMPRKTADALEELNSY
REMKDLLLSKSGTRVVRKEEMK
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggatcgagaatcggggaaattggagcaaattgtttcccaatttcgttccaag
atcttgcacgttattttggactctagggtcccttctcttcaccaccaccaccaccagcaa
cagcaagaatcgctttctcattctcgggtgagaaagactgacaaatggttcaatttagta
ttaggagaccgtcccccagctctggagaatctcaatttctcccttaggaatctctttgat
cctatggtaatagacataatattggttcaccgtggttcttgttcctcatcggtggacaat
ctttatagtccttcagctccagctgcgggacctgctgatgagactgttatcgaaagatgg
gttgttcaatatgattgcccacggtttattgctactccaagcggtgctgatgcttctgtt
tcttataagaagatttacaagaagtcaatcatacttttgagatcactttacacacaaatg
aggcttctccctgcatacagaatctttaagcagctaagttcgttgagccaaacatataat
ttcgatcttgtttacaaggtttcatcatttagtcatcccttctctcgggaagaggagagt
ggaatgaaagaatatatttttgcacctgttgaggctctttcaggttgcctttctgtgtcg
gtgacctaccgtgcaactctatctgatttcaaccttgagcctttggtatctttgccaccg
aaaattataacagactatgttggcagccctacgacggaccctatgagatcctttccttca
tcagataagggtgctcatgctacatcctttcctttaagaggagcacgacctccatcttcg
tctccatttcaacgtccgcacagctggtctagtggttttcacagaggattcccttctaca
aaaactcaatctcttgcaggatctccacctgtttatcgtacatctcccaagccgtatgat
attgcatctccacctactgatttatatggtaatagaattcaaaatcaaagagtgtcaact
ctacaacaggttactgcttatgatgaatataagtcatcacccccgttctcaccatctgct
tctccatcaactccatcatacttatctggtactaatcctttgcttactcgtcattgttct
gagacggctccagtaaccattccacttccactaactggcagaagtactagatatctttct
cctaactcttctgatccaagtaggcattcccttccacctttgtctcctagaagctcaaag
cacgatgcctcatctcaggaatctccttctgggattcggtcatacaggaaaatagaagct
ctaagggcaggagagtctccttctggcttatcgaataattattctgcacagaaggtggtt
agagatagtaaagatgactcgggtcgattctctgcattgttgtcttctagtggatcacct
cgtattggattctctagaagctctagtagattatctttccaggatgacatggatgattgt
gaattctcttgcccttttgatgttgatgatgtcgatgtatctgattcatccagtcaaaac
acagaggggaaaaaggcttcagaattcactgcacagtcaaatctggttggtaaaaaatca
caagatgctgctgttggcattcttgttcacatgcttagaacagcaccgcctctccgacaa
gactcgagttgctattcgacacattcattaaggactgaatatgagggaggtgtcagtatc
gcttctggattttttatgccgcgtaaaacggcagatgcgctcgaagagctcaacagctac
agagaaatgaaggatctactactatcgaagagtggaactcgggttgttcggaaagaggaa
atgaagtag
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