Gossypium raimondii: 105765469
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Entry
105765469 CDS
T04129
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gra03021
]
105765469
Transcription machinery [BR:
gra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
105765469
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
DUF6697
GerE
Motif
Other DBs
NCBI-GeneID:
105765469
NCBI-ProteinID:
XP_012440030
UniProt:
A0A0D2T7Q8
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Position
12:complement(55572010..55575296)
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AA seq
516 aa
AA seq
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MGVVSVSSSAARTPVGLGTKFSTQRCTFRRPCIVAFKADKSNNTALVTLRDHNLLPVETA
KEHPKRRGKAKKASKTVNRDFTDEGSPYTVDVDYNEAAAKLENIYKLSPSTQTFDEKGSE
GETKGRQLRRKRSKESDGKADNGDDKIVVRSQTKKNRRLGLDKRIELKKNREEKSVVSGQ
SKKGISNESEKIDRLVRDYSASTDLVSLDWKKMKMPPVLPSTEHTWLFKLMQPMKALLEA
KENLQKDLGRDPTEDELAEATNSSAAQVRRQLEVGRAARNKLIKHNLRLVLFVIKKYFQD
FANGPRFQDLCQAGVKGLITAIDRFEPRRRFRLSTYGLFWIRHAIIRSMTLSSFTRVSFG
LESVRVEIQRAKLELLFELHREPTDDEVIKRVGISPERYQEVMRASKPVASLHLRHSVTQ
EEFISGITDVDGVGGDHRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRTLGEI
AGNLSISREMVRKHEVKALMKLKHPARVDYLRRYVV
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgttagtgtttctagttcagctgcccgaactccagtaggattaggcacaaag
ttttctactcaaagatgtacatttagaagaccttgtattgtggcatttaaagcagataaa
tctaataatacggctctagttacgcttcgagaccataatcttttgccggtggaaacggct
aaggagcacccgaagagacgcgggaaagcgaaaaaggcttccaagactgtaaaccgtgac
tttactgatgaaggttctccgtacaccgtggacgtagattacaacgaagccgctgccaaa
ctcgaaaacatttataagcttagcccttcgactcaaacatttgatgaaaaagggagtgaa
ggtgagaccaaaggacgccagctgaggaggaagagatctaaagaaagtgatgggaaagcg
gataatggtgatgataagatcgtggttcggagccagactaagaagaatagaagattgggc
cttgataaaaggattgaactgaaaaagaatagagaagaaaagtcagttgtttctggccag
agtaaaaagggtatctcgaatgaaagtgagaagattgataggcttgtccgggactattcg
gcttcaaccgatttggtcagcctggactggaagaaaatgaagatgcctccggttctgccg
tccaccgaacatacttggttgtttaagctaatgcagccaatgaaggcactgcttgaggca
aaagagaacttgcaaaaggatctgggtagagatcctactgaagatgaattagctgaggca
acaaattcgagtgcagctcaagtgagaagacagttagaggttggtcgagctgctagaaat
aagctcattaagcacaacctccggctcgttttgtttgtgataaaaaaatattttcaagat
tttgcaaatggtccaagatttcaagacctttgtcaggctggagttaaaggacttatcaca
gccatcgaccgctttgaaccaagaaggagattccgtctttctacatacggtcttttttgg
attaggcatgcaattatacgttccatgaccctatcaagcttcacgcgtgtttcatttgga
cttgaatcagttagagtagaaatccaaagagccaaactggaattattgtttgaacttcat
agagaaccgacagacgatgaagtaataaaaagagttgggatttcccccgagaggtaccaa
gaagtaatgagggcctcgaaacccgttgcatctcttcatttgaggcattccgtcacacaa
gaagagttcattagtggaatcaccgatgtcgatggtgttggaggcgatcaccgaaggcaa
cctgctcttctcaggcttgcacttgatgatgtgctcgattctctgaagccaaaagagagc
ctggtaatcaggcagagatacggactcgacggtaaaggtgatagaacattaggagaaatt
gctgggaacttaagcatttcgagagaaatggtccgaaagcacgaagtaaaggcacttatg
aagctcaagcatccagcccgagttgattatctccgccgatacgtcgtctga
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