Gossypium raimondii: 105765913
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Entry
105765913 CDS
T04129
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
gra
Gossypium raimondii
Pathway
gra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105765913
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gra03400
]
105765913
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
105765913
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
105765913
NCBI-ProteinID:
XP_012440643
UniProt:
A0A0D2QNR5
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All DBs
Position
5:complement(22392962..22396552)
Genome browser
AA seq
1001 aa
AA seq
DB search
MSVASRTRSRKGKAPCGDSSKKRKKTLAVEEVRLAATNMATPQSSVNVKVSLASQKGTAQ
VQTLREEFDGELRGKDGNDPDPYIICLGSSDDDGDDDEDEDSEDDEALTSTSGEDNSDSS
DLDYREEEGEGEDPQSSSSSEDEVEETPSHGIAKRKATEVEFLGENGSTVDEVEETPSHD
IAKRKATEVEFLGENGSTVDEVVMKPKSKRRRSASAKSGQVHLLSVFVDSILDNQDSDSS
TQGEDPILQQETYENPLPLKFTFGVEDSIVPDKTEFENEMNSLWSEMEISLMSDPTSTLP
SPLENEDADVSEFEHDTTTHSLCLQGKHHLVLDEEIGMKCKFCSFLLLEIKDISPPFMTD
RFGKYERQFSGIVDYSMFDDLHCEDSNNDMSGFDHSAEIEGTVWEIIPNLKTKLYPHQHE
GFEFIWNNIAGGIYRDKSKNSSKGCGGCIISHAPGTGKTLLTIVFLQTYLNEYPSCRPVI
VAPRSMLLTWEAEFRKWKVDIPFHNLNTLDFSGKEKPKAIGLYEKFKLKVPCQDRALARR
LVKLLSWKSDRGILGISYKLFVQLAVVDNEEKHKCTTLNKDVSKILLELPGLFVLDEGHT
PRNDDTLIWKALSRIKTERRIILSGTPFQNNFDELFNTLYLVRPKFAEGIQSRHRVEVNN
KCSDEGKEAKRKWAYLTGSIGKDDIYEAEKLRELKAVIKPFVHVHNGRILQTTLPGLRHS
VVVLRPSDLQSRILERVKETKNALLRDYYVSLISTHPSLLQQLSNKEDIKEKVSSIVSMD
MLERIRLKPDKGVKTKFLMELLKLSGALGEKVLVFSQYLEPLNLIVDQIKDFFKWKEMEE
ILYMDGQCEMKQRQRVINVFNDPTSKARVLLASTKACSEGINLVGGSRVVLLDVTWNPSV
ERQAICRAYRLGQQRMVYTYHVISSGTMEGFKCYRQAEKDRLSELLFSASHRRDDHHKKG
FNCPEDKILEAMVGQEQFTSMIEKIINEPKDSDLIVTYGGL
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgcttcaagaacaagaagcaggaaggggaaagcgccgtgtggtgatagcagc
aagaaaaggaagaagacactggcggtggaggaggtgcggttagcggcaacaaatatggca
acgccgcagtcttccgtcaatgttaaagtgtctttggcttctcaaaagggcacggctcaa
gttcaaaccttgagagaagaattcgacggtgagttacgcggaaaagatggaaacgaccct
gacccttacattatttgtctgggtagtagtgacgatgatggtgatgacgatgaagatgaa
gacagtgaggatgatgaggctctcacctctacaagcggagaggataattctgactcaagc
gatttggattatagggaggaggaaggggagggagaggatcctcaatcctcttccagttcg
gaagatgaagtcgaagagacgccaagccacggcattgccaaaagaaaggctactgaggtt
gagttccttggggagaatggttccactgtcgatgaagtcgaagagacgccaagccatgac
attgccaaaagaaaggctactgaggttgagttccttggggagaatggttccactgtcgat
gaagttgtaatgaagcctaagagtaaaaggagacggtccgcctctgccaagtccggccaa
gttcaccttcttagtgtttttgtggattctattttggacaaccaagactcggattctagt
acacagggagaggaccccattctccaacaagaaacctacgaaaaccctttgcctctcaag
ttcacttttggagttgaggactcaattgttccggacaaaactgaatttgagaacgaaatg
aattcactctggtctgagatggagatttctcttatgtctgatccaacttcgaccctgcca
tccccgttggaaaatgaagatgctgatgtatctgagtttgaacatgacacaacaacccat
tccctatgtcttcaagggaagcatcatcttgtgttagacgaagagattggaatgaaatgc
aaattttgttctttcctgctgctggagatcaaagatatctcaccgccttttatgactgat
cgttttggaaaatatgagaggcaattctctggcattgtagattattctatgtttgatgac
cttcactgtgaagactctaacaatgatatgtctggttttgatcactctgctgaaatcgaa
ggcacagtgtgggaaatcattcctaacttaaaaactaaactctacccccatcagcatgaa
ggttttgaatttatttggaataacatagctggagggatttatcgtgacaagtcaaaaaac
tcatccaaaggttgtggtggatgcattatatctcatgctcccgggacggggaaaacgctt
ctaactattgtctttcttcagacgtacttaaatgaatatccgagttgcaggccagtgatt
gttgctcctcgcagtatgctactcacatgggaagctgagtttagaaagtggaaggttgac
attccctttcacaatctcaacactctggatttttctggcaaggaaaaaccgaaggcaatt
ggtctttatgaaaaattcaagctgaaagttccatgtcaagatagagctcttgcccgacgt
ctggttaagttgctttcctggaaatctgatagaggcattttgggaatcagttacaaactt
tttgtgcaacttgctgtagtagataatgaggagaagcacaagtgtacaacattaaataag
gatgtaagtaaaatccttcttgagcttcctggcctttttgttctagatgaagggcacaca
cctagaaatgatgatacgcttatatggaaggctttatcaagaatcaaaacagaacgtcgt
atcatactctcaggaactcctttccaaaataattttgatgagctcttcaacactctctac
ttagtgagaccgaaatttgctgaaggaatccagtctagacatcgagtagaggttaataat
aagtgtagtgatgaaggaaaagaagcaaaaaggaaatgggcctatttgactggttccatt
ggcaaagatgatatatatgaagctgaaaaattgagagagcttaaagctgtgattaagccc
tttgtgcatgtacataatggtagaattctacaaactacccttcctggtttgaggcattct
gtggttgttttacggccctctgatctgcagagtagaatcctcgagcgtgttaaagaaaca
aaaaatgcattattgcgggactattatgtgtccttgatctccacccacccttctttgttg
cagcagttatccaacaaggaagatattaaggaaaaagtcagctccattgttagtatggat
atgctagaaaggataagactgaaacccgataaaggagttaaaacgaaattcctcatggaa
cttcttaagcttagcggggctctgggtgaaaaggtcttagttttcagtcaataccttgaa
ccattaaacctaatagtggaccagataaaagattttttcaaatggaaggaaatggaggag
atattgtacatggatgggcaatgtgagatgaagcagcgtcaaagggtaattaatgttttc
aatgatcccacgagcaaagcaagggtgttgcttgcatcaacaaaggcttgctcggaaggt
ataaatcttgttggtggttctagagtggttttgcttgatgtgacatggaacccctctgtg
gaaagacaagctatatgccgtgcatacaggcttggacagcaaagaatggtatacacttac
cacgttatctcatctgggacgatggaggggtttaaatgctatcgacaagctgagaaggac
cggttatcagagctattattctctgcttctcacagaagggatgatcatcacaagaaagga
tttaattgcccagaggataagatcttggaagcgatggtagggcaagagcaattcacttca
atgattgaaaagataataaatgagcccaaagattccgacttgattgtaacttatggaggt
ctgtaa
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