KEGG   Gossypium raimondii: 105766229
Entry
105766229         CDS       T04129                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
gra  Gossypium raimondii
Pathway
gra03020  RNA polymerase
gra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105766229
  09124 Replication and repair
   03420 Nucleotide excision repair
    105766229
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gra03021]
    105766229
   03400 DNA repair and recombination proteins [BR:gra03400]
    105766229
Transcription machinery [BR:gra03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     105766229
  RNA polymerase III system
   RNA polymerase III
     105766229
  RNA polymerase I system
   RNA polymerase I
     105766229
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105766229
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 105766229
NCBI-ProteinID: XP_012441059
UniProt: A0A0D2UWF0
LinkDB
Position
5:46210832..46214516
AA seq 145 aa
MSSIILFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMYMHLDVNTEIYPMHVGDKFTMA
LAHTLNLDGTPDTGYYTPGRKSLADKYEYVMHGKLYKITDDASGKGLKAELYVSYGGLLM
LLRGEASHVSHFELDQRIFLLMRKL
NT seq 438 nt   +upstreamnt  +downstreamnt
atgtcaagcataatacttttcgaggacatttttgtggttgataagcttgacccagatggt
aaaaagtttgataaagttactcgaattgaagcacggagccaaaactgtgacatgtacatg
cacctagatgtgaatacagagatataccctatgcatgttggtgacaaattcacaatggct
ttagctcacacattgaatttggatggaactcctgacactggctattacactccgggaagg
aagtctcttgctgataagtacgagtatgtcatgcatgggaagctatacaagataacagat
gacgcttcaggcaaaggacttaaagcggagctctatgtttcatatggagggcttctaatg
ctgctcaggggagaagcttctcatgtctcccactttgaactcgaccagagaatatttctt
ctcatgaggaagctctga

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