Gossypium raimondii: 105766245
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Entry
105766245 CDS
T04129
Name
(RefSeq) isochorismate synthase 2, chloroplastic isoform X1
KO
K02552
menaquinone-specific isochorismate synthase [EC:
5.4.4.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00130
Ubiquinone and other terpenoid-quinone biosynthesis
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
gra01240
Biosynthesis of cofactors
Module
gra_M00932
Phylloquinone biosynthesis, chorismate (+ phytyl-PP) => phylloquinol
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
105766245
09109 Metabolism of terpenoids and polyketides
01053 Biosynthesis of siderophore group nonribosomal peptides
105766245
Enzymes [BR:
gra01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.4 Transferring hydroxy groups
5.4.4.2 isochorismate synthase
105766245
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Gene cluster
GFIT
Motif
Pfam:
Chorismate_bind
Motif
Other DBs
NCBI-GeneID:
105766245
NCBI-ProteinID:
XP_012441074
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Position
5:complement(46779747..46786823)
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AA seq
536 aa
AA seq
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MFGNEARRVVAWMNGCEGDPKLPIGSIETRTLTVVPSPSKAMERLSVAIRELKCSPLPLT
SGILRLQVPIEEQIEAIEWLHAQHDNLPRCFFSGRRSRANGNGSNLLMDIGNENGDTSFT
NNLVGVAGVGSAVFFQQLRPFSYHDWRSIKRFLSSECPLIRAYGAIHFDATANISPEWKA
FGSFYFMVPQVEFDELEGSSMLAITIAWDNALSWTWDEAIHSLETTMQQIASVVVKLKKE
ASGESILRKTHVPNKTHWDLAVKKALQEINTSSSELVKVVLARSSRILTATNIDPIAWLA
SLQVEGEDAYQFCLQPPNGPAFVGNTPERLFHRKWLSISSEALAATRARGESRALDLQIE
HDLLSSPKDHLEFTVVRENIQNKLESVCDRVVVEPKKTVRKLPRIQHLYAQLTGNLRRED
DEFEILSSLHPTPAVCGLPKEAARLFISETEMFDRGMYAGPVGWFGGGESEFAVGIRSAL
VEKDSGALIYAGAGIVEGSNPSSEWDELELKTSQCTKLLQLEVPRQSKVENLEIIY
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaaatgaggctaggagagtagtagcatggatgaatgggtgcgaaggagacccc
aaactccctataggcagcatagagacgcgcacattaactgtcgttccatctccatcaaag
gcgatggagaggttgagtgtagccattagagagttgaaatgcagccctcttcctcttacc
tctggcattcttcgacttcaggtaccgatcgaggagcaaatcgaagcaatcgagtggctc
catgctcaacatgataatcttccacgttgtttcttctctggtagaagaagcagagccaat
ggaaacggttccaatctcttgatggacataggtaatgaaaatggcgacacctcttttacc
aataatcttgttggtgtcgccggtgtcggctcagcggtcttctttcaacaacttcgtcct
ttctcatatcacgattggaggtcgattaagaggtttctgtcttcagagtgccctttgatt
cgtgcatatggagcaattcattttgatgcgacggctaatatatcacctgaatggaaggcg
tttggttcattttactttatggtccctcaggttgagtttgatgagcttgaaggaagttca
atgcttgccataacgattgcatgggacaatgccctttcatggacttgggatgaagccatt
cattcacttgaaaccacaatgcaacagattgcttcagttgttgtaaagttgaagaaagaa
gcttcaggagaatccatcctcagaaaaactcatgttcccaataagacacattgggatctt
gctgtaaagaaagctttgcaggaaataaacacaagcagctcagagctcgttaaggttgtg
cttgcccgtagcagcaggattttaactgctacaaatatcgatcctatagcttggttggct
tctctgcaggttgaaggagaagatgcatatcagttttgtcttcagccacctaatggacca
gcatttgtgggaaatacaccagagcgactatttcacagaaaatggctaagcattagtagt
gaggcactggctgcaacccgcgctagaggtgaatccagagcgcttgatcttcaaatagag
catgatctactttccagtcccaaggaccacctggaatttactgtagtacgagaaaacata
caaaacaaattagagtctgtatgtgatagagttgttgttgagccgaagaaaacggtacga
aaacttccaagaattcaacatttatatgcccagttgactggtaacctgagaagggaagat
gatgagtttgaaatcttgtcttctctccacccaactccagcagtttgtggacttccaaaa
gaagctgcacgcctcttcatttcagaaactgaaatgtttgaccgagggatgtatgctgga
ccagttggttggtttggaggaggagaaagtgagtttgcagttggtataaggtcagcatta
gtggaaaaggattccggagcattgatatacgccggagccgggatagtagaaggcagcaat
ccctcgtcagaatgggatgaactagaactcaagacatctcagtgcaccaagttgcttcaa
ctggaggttcctcggcaatcaaaagttgagaatttggaaatcatttattaa
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