KEGG   Gossypium raimondii: 105766381
Entry
105766381         CDS       T04129                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
gra  Gossypium raimondii
Pathway
gra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105766381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gra03019]
    105766381
   03041 Spliceosome [BR:gra03041]
    105766381
Messenger RNA biogenesis [BR:gra03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     105766381
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     105766381
Spliceosome [BR:gra03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    105766381
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 105766381
NCBI-ProteinID: XP_012441270
UniProt: A0A0D2U197
LinkDB
Position
5:50119202..50124791
AA seq 432 aa
MQFMDPTKKRKLDENGIISAVSEPDPITKLTPQDGRKLIERFTVDQLLDILQDAVCRHFD
VLSAVRSIADQDPSQRKLFIRGLGWDTTTDGLRSLFSVYGELEEAVVILDKATGKSKGYG
FVTFKHVDGALLALKEPSKKIDGRVTVTQLAAAGNSGTNTNPVDVHMRKIYVANVPYDMP
ADKLLGHFAQYGEIEEGPLGFDKQTGKSKGFALFVYKTAEGAQSALVEPVKNIDGRQLNC
KLAIEGKKGKPGQDGMMQSGVGAAGNTEMGVGGHGGGYGGHVGPGGPGGMGGYGGFPGGL
QGPPGPMGHPHHLNSSGVGVGALSGSGGAAGGGYGSGLSGPYGGYGGPGSTGYGGLTGAG
AGVGLSGAALGSSLYRMPPNSVGMPSGGYPETAHYSLSSAAAFPSQHHQGAGTSPVPRVP
PGGMYPNGPPFY
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgcaattcatggatcccactaagaaacgcaagcttgatgaaaatggtattatttccgcg
gtatcggaacctgacccaatcaccaaactaaccccacaagatggccgcaagctaatcgag
cgattcaccgtcgatcaactccttgacatcctccaagacgccgtttgtcgtcactttgat
gttctttccgccgtacgctctattgccgatcaagatccatctcaaaggaagctcttcatc
cgtgggttgggttgggatactacaaccgacggccttcgttcacttttttcggtctatggg
gaactcgaagaagcggtcgttatcctcgacaaggctactgggaaatccaaagggtatgga
ttcgttacctttaagcacgtcgatggtgctttgcttgctcttaaagaacccagtaagaaa
atcgacggtagagtcacggtgactcagctggcggcagcggggaactcggggacgaatact
aaccctgtggatgttcatatgaggaagatttatgtagccaatgtgccgtacgacatgcca
gcggataagttattgggtcattttgcacagtatggggaaattgaagagggtcctttgggc
ttcgataagcagaccggaaaatcaaagggatttgctctttttgtttataagacggcagaa
ggggctcagtcggcgttggtggagccggtgaagaatattgatgggagacaattgaattgt
aagcttgctattgaagggaaaaaagggaagccgggacaagatgggatgatgcaaagtgga
gttggggctgcaggaaatacagagatgggggttggaggacacggtggtggttacggtggc
catgtggggcctggtggaccaggtggcatgggtggttatggtgggtttcctggtgggttg
caagggccgcccggcccaatgggtcatcctcatcacttgaattcttcaggagttggggtt
ggggcattgagtgggagtggaggcgccgctggtggtggttatggttctggtcttagtggg
ccgtatggtggttatggtggaccaggttcaactggctatggtgggttgactggtgctggt
gcaggggttggtttgagtggtgcagctttagggtcttctttatatagaatgccaccgaac
tctgttgggatgccatctgggggatatccggagactgctcattacagcttgtcttccgca
gctgctttccccagtcagcatcaccaaggagctgggacgtcccctgtgccgagagttcca
cctggtggaatgtatcccaacggaccacctttctactga

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