Gossypium raimondii: 105766573
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Entry
105766573 CDS
T04129
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC105766573
KO
K20305
trafficking protein particle complex subunit 8
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105766573
Membrane trafficking [BR:
gra04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
105766573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_C
Ig_TPPC8_2nd
SNAP
Ig_TRAPPC9-Trs120_4th
TRAPPC13_C
Ig_TRAPPC9-Trs120_1st
Motif
Other DBs
NCBI-GeneID:
105766573
NCBI-ProteinID:
XP_052485445
LinkDB
All DBs
Position
4:complement(25387291..25407028)
Genome browser
AA seq
1285 aa
AA seq
DB search
MVDPANTPLGKMLLEEITPVVMVLCTPLVEESCLKNGLSFVQMLSPFCDFTNIDVPVRTA
SDQPYRLHKFKIRLFYASDIRQPNLEVAKERLKQVITKAGEDDFPEIYSDLPQVNDLLSR
HESEILPTWFQFFNKELVRTLSFSDHEAFDHPVACLLVVSSRDEESINRFIDLFNTNKLP
SFLSDGAMDPKVLKHYLLVHDNQDGASEKATKILTEMRSTFGPNDCQLLCINSSQDGQTR
HKDTPWSTFRSDAXATEHLGRFLKLDDLNEIKNLMQELSSKHIIPYMEQKIRLLNQQVSS
TRKGFRNQFKNLWWRKGKEDALDTTNGPVYTFSSIESQIRVLGDYAFMLRDYELAVSSYR
LISTDYKLDKAWKRYAGVQEMIGLTYFMLDQSRKEAEYCMENAFNTYLKLGSAVQQNATR
CGLWWIEMLKTRNQIKEAATVYFRICGEDLLHSAVMLEQASFCYLLSKPPMLHKYGFHLV
LSGDHYKKCDQIKHAIRTYRNAVSVYRGTTWNLIKDRVHFHIGQWYASLGMYDVAVTHML
EILASSHQSKTSQELFLRDFLHIVQKTGKTFEVLKLQLPVINISSLKVIFEDHRTYASPA
AASIKEGVWRSLEEDMIPSLSAKSNWLDVQSKLIPRKYKESNICVAGEAIIVDIEFKNPL
QIPISILNVSLICELSANPEELNSEANSSNVEPQNDEYKTSTSTGDINSSLVLLEVDFSL
EGGETILVQLTVTPRVEGVLTIVGVKWKLSSSVVGLHNFESNSVNKRIAKGRRKPKHSPS
ADLKFIVIKSLPRLQGFIPSLPEKTYAGDLRHLVLELNNQSKFPVKNLKMKISNPRFLNA
GNQSYLNVEFSACLEKKLNVEQSGGHANAKKMLQNVFHFPEDISVQEETSLSWPLWFHAA
VPGNISLYITVYYEMENVSSIMKFRTLRMHYNLNFVLPSLDVSFELSPCPSRLEEFLLRM
DVVNKTSSECFQIHQLSSVGQQWDVSLLQPVDSILPSQSLFAGQVLSCFFMLKYHRKSST
SEDSNPLFLQSDVRLGPPGNSEALFDVCSSPLADFHDYERLYQGMSCQGNVDFVFITQLW
RGNIDSGAPHRPLLFSHHVCHSSLSSFSPISWSVDGPRTIQHNFSASPCGVNLKMTINNS
SDAASSVHVKTFDPPSSNSQSIDATASQSGLPLENQAGWFSIPAVNDTKVITTDALAKRI
TKSVSLESAPQFIWTGSSSTKLKLQPRATAEVPLQICVFAPGIYDLSNYALNWNLAPIEE
SQGEANKSSGECQGYPYYLTVLQST
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atggtggatccggcgaatactccgcttggaaagatgctgttggaggagatcactccggtg
gttatggtgctttgcactccactcgtggaagaatcttgccttaagaacggcctctccttt
gtccaaatgctctcccctttctgcgacttcaccaacatcgatgtgcctgtacggacggcg
agtgatcaaccctacaggttgcacaagttcaaaattaggttgttttacgcctcggatatt
cggcaacccaatctcgaggtagcaaaggagagactaaagcaagttattactaaggcggga
gaggatgatttccctgaaatatattcagatctacctcaagtgaatgatcttctctcaagg
catgagtctgaaattttaccgacatggtttcagtttttcaataaagagcttgtacgtacc
ttgtctttttctgatcatgaagcttttgatcatcctgtggcatgccttttggttgtttct
tcaagggatgaggaatccataaatagatttatagacctctttaacaccaacaaattgccc
tcctttctcagtgatggtgcaatggacccaaaggttttgaagcattacttacttgtgcac
gataatcaagatggtgcttcagagaaggctactaaaattttgactgagatgagaagtaca
tttggcccaaatgactgtcaattactttgcattaattcttctcaagatgggcagactcgc
cataaagataccccttggtctacttttagatctgatgcttaagctactgaacatcttggc
cgcttcctcaaactagatgaccttaatgaaattaagaatctcatgcaagaattatcatct
aaacacatcattccttacatggaacaaaagatacgtttgttgaaccaacaggtttcttct
acaaggaaaggttttaggaaccaatttaaaaacttatggtggaggaaggggaaggaagat
gcattggacaccacaaatggtcctgtgtatacctttagctcaattgaatctcagattaga
gttttgggtgactatgcattcatgttacgagactatgagcttgccgtctccagctatcgc
ctaatttccactgattacaagcttgataaagcctggaagcgctatgctggtgtgcaggag
atgatcgggcttacatacttcatgcttgatcaatcacgaaaagaagcagagtactgcatg
gaaaatgcatttaatacctatttaaagcttgggtctgctgttcaacaaaatgctacaaga
tgtggtctttggtggatagagatgctgaagacaagaaatcagattaaagaagctgccact
gtttatttccgcatttgtggtgaggatcttttacattcagctgtgatgctcgagcaagct
tctttttgctacttgttgtcaaaaccaccaatgctgcataaatatgggtttcatcttgtt
ctctctggtgatcattataaaaaatgtgatcagattaaacatgcgatacgcacatatagg
aatgctgtttctgtttacagaggaaccacatggaaccttattaaagatcgtgttcatttc
cacattggacagtggtatgcttctcttggcatgtatgatgttgcagtcactcatatgctg
gagatcttggccagcagtcatcaatcaaagacatcacaggagctatttctgagagatttt
cttcatattgttcagaaaactggaaaaacgtttgaggtgttgaaacttcagttacctgtt
atcaacatttcctcacttaaggtcatttttgaagatcatcgaacttatgcatctccagcg
gctgcaagcatcaaagaaggtgtatggcgttcactggaggaggatatgatcccatcattg
tctgccaagtccaactggctggatgtgcaatcaaagcttattccgagaaaatataaagaa
tcaaatatttgtgtggcaggagaagcaataatagtggatattgaatttaaaaaccctctg
caaatccctatttccatcttaaatgtttcattgatatgcgagctttctgcaaatcctgaa
gaattgaactctgaggcaaatagttcaaacgtcgagccccagaatgatgaatacaaaaca
tcaacttccactggggatattaattcatctttggttttattggaggttgacttttcactg
gaagggggtgaaacaatcttggtgcaactaaccgttacaccaagagtagaaggcgttctg
acaattgttggtgttaaatggaaattgtcaagttcagtagtaggcttgcataattttgag
tctaactctgtgaacaaaagaattgccaagggaagaaggaaacccaagcattcgcccagc
gctgacttgaagtttatagtgattaagagtctacccaggcttcagggttttattccttct
ttaccagaaaaaacatatgcgggagacttgcggcatcttgtgttggagttaaataaccaa
tcaaagtttcctgtcaagaatctaaagatgaagatcagcaacccgagatttctaaatgct
gggaatcagagttatttaaatgtagaattttctgcttgcttagaaaagaagttgaatgtt
gagcaaagcggtgggcatgctaatgctaagaaaatgttgcagaatgtgttccattttcct
gaggacatatcagtgcaggaggaaacatcattatcttggcctctttggtttcatgctgct
gttcctggcaatatttctttgtacattactgtatattatgaaatggaaaatgtatcaagc
attatgaaattccgcactctacgtatgcattataatttgaattttgttttaccatcgttg
gatgtatcatttgaacttagtccttgtccatcaagattggaagagttcctcttgcgtatg
gatgttgtcaacaagaccagttctgaatgtttccagattcatcaattgtcttctgttggg
cagcagtgggatgtctcattgctccaacctgttgatagcattttaccgtctcaatcctta
tttgctggtcaagtattgtcatgcttcttcatgcttaagtatcacaggaagtcatcaact
tctgaagacagtaatcctcttttcctccagagtgatgtaagactcggacctccgggaaac
agtgaagccctcttcgatgtatgttcttcacctttggctgatttccacgattatgagaga
ttgtaccagggaatgtcatgtcaggggaatgttgatttcgttttcatcactcaactgtgg
aggggtaatattgattctggtgctcctcatagaccacttcttttttcccatcatgtttgt
cattccagtctttctagcttcagtccaatatcttggtccgtggatgggcctcggaccata
caacataacttctcagcttctccatgtggagtaaatttgaagatgactataaacaattca
tccgatgctgcttcatctgtccatgtcaagacctttgatccccccagtagtaacagccaa
tcaatcgatgctactgcatctcagtcaggtctccctctggaaaatcaagcagggtggttc
agcattccagcagtgaatgacacgaaagtcatcacaaccgatgctcttgcaaaacgtatt
acgaagtcggtttccttggaaagtgccccccagttcatttggacaggttcaagctctact
aaactcaaacttcaacctagggcaacagctgaagttcctcttcagatctgtgttttcgct
cctggaatatacgatttatcaaactatgctttgaattggaatctagcacccattgaagaa
agtcaaggagaagcaaacaagtcttcgggagagtgccaaggatatccctattatcttacg
gtgctgcaatctacttaa
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