Gossypium raimondii: 105767367
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Entry
105767367 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105767367
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
gra
Gossypium raimondii
Pathway
gra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105767367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105767367
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105767367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
105767367
NCBI-ProteinID:
XP_012442329
UniProt:
A0A0D2TGV7
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Position
5:430644..438887
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AA seq
812 aa
AA seq
DB search
MMRGGRSLVSSPPAFSNDAKKLLVCTSNTVSVFSTVTGLLITSLEGHTALVTSVIVVPPS
NPAAKVLCYCWTASLDGTIRYWDFSLPELMKTIDIRMPIFSMVIPSFLDVPAEENGKHQD
LFAYVSIEDAKETQERTKASRRQIRKCNLSKSRLVGRLILGETRKPEVLTVSPSGKFFGI
RNKCKLHIWKVLDQGSERAAVRKITLHHTKKITVIAFHPTQRIIAAGDVTGRILTWRGFG
NRAFAASNGVADQKLINVQEDKPGVRDNDDADSCSTWHWHSAEVNVLSFSSDGSYLYSGG
KEGVLVVWQLDTGKKKFLPRIGSPLLYFIDSPDPTLSSISCADNQIHLLKMPSMGILKTI
SGIKAPCCYPDMYEGLGNGIAFDQTAGIVAVRTENYCIQFYSLFDDRGVSEVQVCERNHQ
PGDDVTVIVTSVALSIDGSLMSTSEVKLAEEGIGGLVCLKFWDAGSQNKEFSLSTIVYEP
HRDAGISAVKFHPSGNMVVSSSFGGDFKVWKCNHDVIQNDQMRQNFSWTCHAVGSYKKKP
MTAAAFSADGSVLAVAAETLITLWNPYKNVLLAVLGETLTPIVNLSFVGKSDNLVAASCG
SNPQLSVWNMSKLSLSWSYKLHIEAVASAVDLSSFAALVLLPESSKKTTFKGMDGVILLF
NATDPVPTVIWSVRKAKGGALCFVQVSPSSVEEISIDGKAPEVLLAYMNGDHEYVLFDPY
CKDAREVSVSQKEGLAAHDHKGQAGQYGYASIYGELPEFDRKRPEAPWVPSFPSDRPWET
IFSGSSHNLPPLTKLCSAFLESLLEKRTAAAE
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaggtggtcgaagcttagtgtcttcacctcctgccttctctaatgacgccaag
aaactcctcgtctgcacctccaacaccgtctccgtcttcagcaccgtcaccggcctcctg
ataacctccctcgagggtcacacggcgctcgtcacctccgtcatcgtagttccgccttcg
aatccagccgcaaaggttttgtgttattgttggaccgcttcgcttgatggcaccattcgt
tattgggatttttctttgcctgagctaatgaaaactatcgatattcgaatgccaatcttc
tccatggtgattccatctttccttgacgttccagctgaggaaaatggaaagcatcaagac
ctttttgcatatgtgtctattgaagatgcaaaggaaacacaagagaggaccaaagcctcg
agaagacaaatccggaagtgtaacttaagcaagtctcgtttagttggtagattaattttg
ggagagacaagaaagccagaggttttaactgttagtccatcaggaaaattctttggcatc
cgaaataagtgcaagcttcatatatggaaggttcttgatcaggggtctgagcgtgcagca
gttaggaagataacactacaccatacaaagaagattactgtcattgcattccatccaact
cagagaattatagctgcaggggatgtaactgggagaattttgacttggaggggatttggt
aatagagcctttgctgcaagtaatggagtagcggaccaaaagttgataaatgttcaagag
gacaaacctggggtgagagataatgatgatgctgattcctgctctacatggcattggcac
tcggctgaagtcaacgtcctctctttctcttcggacggctcatacttgtattcaggtgga
aaggaaggagtgcttgtggtttggcaactagacactgggaagaagaaatttctaccacga
attggatctcctctgctgtatttcatagattctccggaccctaccctttcttctatatct
tgtgcagataatcaaattcacctgctgaaaatgccttcaatgggaattctgaagactatt
tcggggataaaggctccatgttgttatcctgatatgtacgaaggcttgggtaatgggatt
gcttttgaccaaactgctgggatagttgctgtacgcacagagaattattgtatccaattt
tacagcctctttgacgatcgtggagtttctgaggttcaagtttgtgagcgaaaccatcaa
ccaggcgatgatgtcacagtaatagtgacttcagtggctctctccattgatggctctctg
atgagcacttctgaagtaaagcttgctgaagagggcataggtggtctagtttgcctcaag
ttttgggacgcaggttctcaaaacaaagagtttagcttgtcaacaattgtttatgaacca
cacagggatgccggcatttctgctgttaaattccatccttccggtaatatggtggttagt
tcatcttttggtggtgacttcaaggtttggaaatgcaaccatgatgttatacagaatgat
cagatgcgtcagaattttagctggacttgccatgctgttggttcttataaaaaaaagcca
atgactgctgctgccttttctgctgatggttctgttcttgctgttgcggcagaaaccctt
attacattatggaacccctacaagaatgtcctcttggcagtacttggggaaactctcacg
ccaattgtgaacctgtcattcgttgggaagtcagataatcttgtagctgcatcatgtggt
tcaaatccacaactttctgtctggaacatgtcaaagttatctctatcatggtcatataag
cttcatatagaagctgtagcttctgctgttgatttatcttcctttgctgctctggtcctt
cttcctgagtcatctaagaaaacaacttttaaaggaatggatggtgtaatcttattattc
aatgcaactgatcctgttcctactgttatttggtctgtgaggaaggccaagggtggggct
ctttgttttgttcaagtaagtccatcttccgttgaagagatcagtatagatggcaaagca
cctgaggtgctccttgcatatatgaatggtgatcatgaatatgttctgtttgatccatac
tgcaaagatgcccgtgaggttagcgtcagccaaaaggaaggtcttgctgcccatgaccac
aaaggacaagcagggcaatatggttatgcatccatctatggagagttaccagagtttgac
aggaagagacctgaggctccttgggttccatcatttccatctgacagaccttgggaaacc
atattcagtggatcatctcataatcttccgcctctcaccaaactgtgttcagctttcctt
gaatccttattggaaaagagaacagctgctgctgaatga
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