Gossypium raimondii: 105767572
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Entry
105767572 CDS
T04129
Name
(RefSeq) chaperonin 60 subunit beta 4, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gra
Gossypium raimondii
Pathway
gra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105767572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105767572
03110 Chaperones and folding catalysts [BR:
gra03110
]
105767572
03029 Mitochondrial biogenesis [BR:
gra03029
]
105767572
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105767572
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
105767572
Messenger RNA biogenesis [BR:
gra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
105767572
Chaperones and folding catalysts [BR:
gra03110
]
Heat shock proteins
HSP60 / Chaperonin
105767572
Mitochondrial biogenesis [BR:
gra03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
105767572
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105767572
Exosomal proteins of other body fluids (saliva and urine)
105767572
Exosomal proteins of breast cancer cells
105767572
Exosomal proteins of colorectal cancer cells
105767572
Exosomal proteins of bladder cancer cells
105767572
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF6033
Motif
Other DBs
NCBI-GeneID:
105767572
NCBI-ProteinID:
XP_012442596
UniProt:
A0A0D2Q465
LinkDB
All DBs
Position
13:20196893..20202426
Genome browser
AA seq
599 aa
AA seq
DB search
MACSLPPIPGISLTNPTLSKTRRLSSSHYSISKKPRAMAKEVYFNHDGSATKKLQTGVDK
VAELIGVTLGPKGRNVVLQNKYGPPKIVNDGETVLKQIELEDPLENVGVKLVRQAGAKTN
DLAGDGCTTSIVLAHGLITEGVKVVSAGMNPIQIARGIEKTANALVSELKLISREVEDHE
LAHVAAVSAGNDYAVGKMISDAIQQVGRKGVVKIEKGKGTENSLEMVEGMQFERGYLSPY
FVTDRDKMIVEFHNCKFLLVDKKITNPKEMFKILDSAVKEKYPVVIVAEDIEKEALAPVI
RNKLKGVLKAAAIKAPAFGERKRHCLEDIAILTGGTVIRDDMGITLDRVGKEVLGTATKV
VITKDSTYIVSDGSTRESVQKRVSQIQNLVENTEENFQKKILNERIARLSGGIAILQVGA
QTQVELKDKQLRIEDALNATKAAIEEGVVVGGGCILLRLSEKVDSIKNLLDNQEQKIGAE
IFKRALSYPTKLIAKNAGVNGSVVVEKVLSNNDTRYGYNAARNSYEDLIKAGIMDPTKVV
RCCLEHAASVAKVFLTSDAVVVDIVDNMDIKFKPKLTRKKIQSLTKSFFPKKLFPRFSK
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcatgttcactacctccaattcctgggatatcactcaccaacccaacattgtccaaa
accagaaggttatcatcttcacattattccatctccaaaaagcccagagccatggccaaa
gaagtttacttcaaccatgatggttctgccactaagaagcttcagactggtgtggataaa
gtggcagagctgattggggttacattgggtccaaaggggagaaatgtggtgcttcagaat
aagtatggaccccccaagattgttaatgatggagaaactgttctcaaacagattgagttg
gaggatccattggagaatgttggagttaaattagtgaggcaagctggtgcaaaaacaaat
gatcttgctggtgatggttgcactacatctatagttcttgctcatggtttaattacagaa
ggtgtgaaggtagtttcagctggaatgaatccaattcaaattgcccgtgggattgagaag
acggcaaatgcccttgtttctgaactcaaattgatatccagagaggttgaggatcatgaa
cttgcacatgttgctgctgttagtgctggaaatgattatgcagtaggaaagatgatctct
gatgctattcaacaagttggaaggaagggtgtagtcaaaattgaaaaaggaaaaggtact
gagaacagtctagagatggtagaaggaatgcagttcgaacgaggatatttgtctccttac
tttgtcactgatcgagataagatgattgttgagttccacaattgcaagttcctattggtt
gacaagaaaatcacaaatccgaaagagatgtttaaaatattggacagcgctgttaaagag
aagtacccagtcgtgatagttgcggaggatattgagaaggaagctcttgctccggtcatt
aggaacaaactcaagggtgtgctgaaggcagctgctattaaggccccagcctttggtgag
cgcaagaggcactgcttggaagatattgctatcttgactggaggcactgtgatcagagat
gacatgggtataacactagatagggttgggaaggaagttctgggtactgctactaaggtt
gtgataaccaaggattctacctacatagttagtgatggtagtacgcgagaatctgttcag
aaaagagtttctcagatacaaaatctggttgagaacacagaagaaaattttcaaaagaag
atactcaatgaaagaattgccagattatcaggaggaattgctattcttcaggttggagca
caaacacaagttgaattgaaagacaaacaactcagaattgaagatgctttgaatgcaact
aaggcagctattgaggaaggcgttgtagttggaggtggttgtatcctcttgcggctatct
gagaaggtggatagcataaaaaacctgttggataatcaagaacaaaagataggagctgag
atcttcaagagagcattaagctatccaacaaaactaattgccaaaaatgctggtgttaat
gggagtgttgttgtggagaaggtcttatcgaacaatgatacaagatacgggtacaatgcc
gcaaggaactcttacgaggatttgattaaagctggaattatggatccaacaaaggtagtt
cgatgttgtttggagcatgcagcatcggtggccaaggtttttctaacatctgatgctgtt
gtagtagacatagtagacaatatggatatcaagttcaagccgaaactgacgagaaagaaa
atacaaagcttaacgaagtcattcttccctaaaaaattatttcccagattcagtaaatga
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