Gossypium raimondii: 105767583
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Entry
105767583 CDS
T04129
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
gra
Gossypium raimondii
Pathway
gra04136
Autophagy - other
gra04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
105767583
04136 Autophagy - other
105767583
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gra01001
]
105767583
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105767583
Enzymes [BR:
gra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
105767583
Protein kinases [BR:
gra01001
]
Serine/threonine kinases: Other
VPS15 family
105767583
Membrane trafficking [BR:
gra04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
105767583
Autophagy
Autophagosome formation proteins
PI3K complex
105767583
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIK3R4-like_middle
Pkinase
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
HEAT
PK_Tyr_Ser-Thr
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_NOL10_N
NBCH_WD40
WD40_Gbeta
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
HEAT_EZ
CFAP251_N
Beta-prop_CAF1B_HIR1
Beta-prop_WDR41
ASA1
Cohesin_HEAT
APH
TCAD9
Beta_prop_At2g24240
GCFC
Motif
Other DBs
NCBI-GeneID:
105767583
NCBI-ProteinID:
XP_012442604
UniProt:
A0A0D2RSY8
LinkDB
All DBs
Position
5:complement(2155315..2163487)
Genome browser
AA seq
1549 aa
AA seq
DB search
MGNKIARTTQVSATEYYLHDLPSSYNLVLKEVLGRGRFFKSILCKHDEGLVLVKVYFKRG
DSIDLREYERRLVHIKEIFRSLEHPHVWPFQFWQETDKAAYLLRQYFFNNLHDRLSTRPF
LSLVEKKWLAFQLLLAAKQCHEKGICHGDIKCENVLVTSWNWVYLADFASFKPTYIPYDD
PSDFSFFFDTGGRRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAIGCVIAELFLEGQP
LFELSQLLAYRRGQYDPSQHLEKIPDIGVRKMILHMIQLEPESRLSAESYLQNYVAAVFP
SYFSPFLHGFYRCWNPLHSDMRIAMCQRVFPEMLKQMMSKRSSDEMGKGLGKSHTLSGHL
SQEIVAKQQSEEIAPKQKLSSANHLLTKREKIDNASIRDQFKLPGNINTLLGDVEQSNHY
LGEKSTRGDAPKYELSQDFKQHGMQSPVLHQNISDLFRKNDHPFLKKITMDDLNSLMSDY
DSQSDTFGMPFLPLPQDSMKCEGMVLVASLLCSCIRNVKLPHLRRGAILLLKTSSLYIDD
EDRLQRVLPYVIAMLSDPAAIVRCAALETLCDILPLVREFPPSDAKIFPEYILPMLSMLP
DDPEESVRICYASNIAKLALTAYGFLIHSIRLSEAGVLNETNLPQKSLASSGESSGRMQR
SNSDAQLGQLRKLIAEVVQELVMGQKQTPNIRRALLQDIGNLCCFFGQRQSNDFLLPILP
AFLNDRDEQLRAVFYGQIVFVCFFVGQRSVEEYLLPYIEQALGDAIEAVIVNALDCLAVL
CKSGFLRKRILIEMIERSFPLLCYPSQWVRRSVVTFLASSSECLGAVDSYVFLAPVIQPF
LRRQPASLDFEKALLSCLKPPVSREVFYEVLQNARSSDMLERQRKIWYNSSAQSKQWEIA
DLLERGTGELDSMKYWSEKQQSNGSHRPIDSVLQQSGLTEVADDDAKLRALGCNTRNASS
AIDMHDPLCSEKLQFSGLTSPQLNGLNSFMCDKSSEGIPLYSFSMDKRATVAPSAASDTP
LPWMDPISKSFSLASSVPTPKLVSGSFGITAGSKQFYRVVHEPESRENDQIANVNSKFQD
MGLSGTVKGSSVRMEDASTSTDFTGLPSFSRSSSIPDSGWRPRGVLVAHLQEHRSAVNDI
AVSNDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRGLCTAMLRNSAQVVVG
ACDGTIHMFSVDHISKGLGNVVEKYSGIADIKKKDVKEGAILTLLNYPIDNCGIQTFMYS
TQNCGIHLWDTRSSSNAWTLKAIPEEGYISCLVAGPCGNWFVSGSSRGVLTLWDLRFRIP
VNSWQYSLVCPVEKMCLFVPPSSVSVSTTARPLIYVAAGCNEVSLWNAENGTCHQVFRAA
NYDSDAEMSDLPWALARPSAKTSSKSDPRRNANPRYRVDELNEPPPRLPGIRSLLPLPGG
DLLTGGTDLRIRRWDHFSPDRSYCMCGPNFKGVGNDDFYEARSSFGAQVVQETKRRPLTT
KLTAKAVLAAAATDSAGCHHDSVLSLASVKLNQRLLISSGRDGAIKVWK
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaagatcgcgcgaacgacgcaggtctcggcgacggagtattacctgcatgac
ctgccgtcttcgtacaatctggtgttgaaggaggtgcttggtcgaggccgattcttcaag
tcgatcctatgtaagcacgacgaaggtctcgtcctcgttaaggtctacttcaagcgtggc
gattccatcgatctccgtgagtacgagcgtcgactcgttcacatcaaagaaatctttcgc
tcacttgaacacccccacgtttggcccttccagttttggcaagaaacggacaaagcggcc
tatttgttaaggcaatactttttcaataatttacatgatcgattaagtactcggcccttt
ctgagtctcgttgaaaagaagtggttggcgtttcagttgcttcttgcagcgaagcagtgc
cacgagaaggggatatgccatggtgatattaaatgtgagaatgtgttggttacctcgtgg
aactgggtttatcttgctgattttgcctcattcaagcccacatatattccttatgacgac
ccttcagatttctccttcttctttgacaccggaggaagaaggctgtgttatcttgcacca
gagagattttatgagcatggaggtgaaatgcaagttgctcaagatgcacctttgaaacca
tctatggacatctttgctattggatgtgtaattgctgagcttttccttgagggccagccg
ctgtttgaactctctcagcttcttgcatatcgcagagggcaatatgatcctagtcaacat
cttgaaaagatcccagatattggagtacgcaagatgatacttcatatgatccaacttgaa
ccagagtctcgcctatctgctgaaagttatctacagaattatgtagctgctgtatttcct
agctacttctccccatttctgcacggattttatcgttgctggaatcctcttcattctgat
atgaggattgcaatgtgccagagagtgttccctgagatgctgaagcaaatgatgagcaag
aggtcaagtgatgagatgggaaaaggacttggcaagtcacataccttaagtggtcatttg
tcgcaagaaattgttgcaaaacaacagtcagaagagattgctccaaaacaaaagttaagc
tcagcaaatcacttgttgacaaaaagagaaaagatagataatgcttctattagggatcag
ttcaagcttcctggaaacattaataccctacttggggatgttgaacagagcaatcattac
cttggggagaagtcaacaagaggggatgcacctaaatatgaactttcccaagattttaaa
caacatggcatgcaatctcctgtccttcatcaaaatatttctgatttgtttaggaaaaat
gatcacccttttttaaaaaagattaccatggatgatttaaactcattgatgtctgactat
gacagtcaatcagacacgttcggaatgccttttctgcctttacctcaagacagtatgaaa
tgtgaagggatggtgctagtcgcctctctgctttgttcttgcatacgtaacgttaagttg
cctcacttaaggagaggggctatacttttgctgaagacttcttcactatacatcgatgat
gaagatcgcttgcagcgagtgcttccgtatgtaattgcaatgctttcagacccagcggca
attgtgcggtgtgctgcccttgagactttgtgtgacattctgcccttagttcgagaattt
cctccaagcgatgccaaaatttttccggagtatattcttccaatgctttccatgcttcct
gatgatccagaggaaagtgtgagaatttgttatgcaagcaatatagctaagctggctcta
acagcttatggattcttgattcattcaataaggcttagtgaggctggggttcttaatgaa
acgaatttgccacagaagtcattagcgtcatctggtgagtcatctgggcgtatgcagagg
tcaaacagtgatgcacagttaggccaattgaggaagttgattgctgaggtagtacaggaa
cttgtaatgggtcaaaagcaaactccaaacattagaagagcactccttcaggacattggc
aacttatgctgcttttttggccagcgacagagcaatgactttttgttgcccatacttcca
gcttttttgaatgatagagatgagcagctaagggcagtgttctatgggcaaattgtgttt
gtctgcttctttgtgggccaacgaagtgtagaggaatatcttttaccttatattgagcag
gctttaggtgatgcaatagaggctgttattgtcaatgcgctggattgtttggccgttctg
tgcaaaagtggttttttgcggaaaagaatattgattgaaatgatagagcgttcttttcca
ttgctatgttatcctagtcaatgggtaaggaggtcagttgtcactttccttgcatctagc
agtgagtgcttgggagctgtagattcttacgtttttcttgctccagttatacagcctttc
ctacgtcgacaacctgcatctctggactttgaaaaggctcttctttcttgtctgaagcca
ccagtctcaagggaagtattttatgaagtcttacaaaatgctagaagttctgatatgttg
gagagacagagaaagatatggtacaattcatcagcacaatctaaacaatgggaaattgct
gatttactcgagagagggactggggaattagactcaatgaagtattggtctgagaaacaa
cagtctaatggaagtcatagacctattgatagtgtcttgcagcaatcagggctaacagaa
gttgctgatgacgatgccaagctgagagcactggggtgtaatacacgtaatgcttctagt
gcaatcgacatgcatgatccattatgctcagagaagttacagttttcaggcttaacatct
ccgcagctcaatggtttaaatagtttcatgtgtgataagtcgtcagaaggtatacctttg
tactcttttagcatggacaagcgagctacggtagctccttcagcagcttctgatactcct
ttgccttggatggatccaattagtaaatcattcagcctggctagttcagttccaacacct
aagcttgtttcaggctcctttggtataactgccggttctaaacagttctacagagttgtg
catgaaccagaaagtcgggaaaatgatcaaatagccaatgttaatagtaaatttcaagac
atgggattatccggtacagtgaaaggaagttcggttagaatggaagatgcttctacttcg
actgattttaccggactaccctctttttctcggtcttcatcaattccagattcgggttgg
aggcctcgtggggtgttggttgcacacctgcaggagcaccgatctgctgtcaatgatatt
gcagtttcaaatgatcacagtttctttgtgagtgcatctgatgattccactgtcaaagtg
tgggattcaagaaagttggagaaggatatatcatttaggtcgaggctgacttatcacttg
gaaggaagccgaggactatgcactgcaatgctccgaaactctgcccaagttgttgttgga
gcttgcgatgggacaatacatatgttttctgttgatcatatttctaaaggtctaggaaat
gttgttgaaaagtattcaggtatcgctgatataaaaaagaaggatgtgaaggaaggtgca
atacttacccttttgaactaccccatagataactgtggcattcaaacgtttatgtacagc
acccaaaattgtggtattcatctttgggatacaagatcaagttcaaatgcatggacgctg
aaagcaattccagaggaaggctatatatcgtgtctggtagctggcccttgcggcaactgg
tttgtttcagggtcttctaggggtgtgcttaccctttgggatttgaggttccgtattccg
gtgaactcatggcagtattctcttgtatgcccggtagaaaagatgtgtctctttgtccct
ccttcaagtgtctcagtttctacaactgctaggcctcttatttatgttgctgctggctgc
aatgaagtctcactttggaatgcagagaatgggacctgccaccaggtatttagggctgca
aattatgatagtgatgcagaaatgtctgatttaccatgggcattggctaggccatctgct
aaaacaagctctaaatctgatccgaggaggaatgcaaatccaaggtatcgagtggatgaa
ctaaatgaaccacctcctcgtcttccgggtatccgttcattacttcctttacctggtggt
gatctgttgactgggggcactgacttaagaattcgccgctgggaccatttcagccctgat
agaagttactgtatgtgtggcccaaattttaagggagttggaaatgatgatttctatgaa
gcaagatcaagttttggtgcacaagttgtacaggagacaaagagacgacctctaacaaca
aagctgacagcaaaagcagttcttgctgctgctgccactgattctgctggatgccaccat
gattctgtcctctctttggcttcagtgaaattaaaccagagactcttaatctcaagcggt
agagatggggctattaaggtttggaagtga
DBGET
integrated database retrieval system
