Gossypium raimondii: 105767716
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Entry
105767716 CDS
T04129
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105767716
03015 mRNA surveillance pathway
105767716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105767716
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105767716
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105767716
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
105767716
NCBI-ProteinID:
XP_012442742
UniProt:
A0A0D2V0N7
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Position
4:complement(17664131..17668079)
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AA seq
501 aa
AA seq
DB search
MAETASNSAPSTTTTAEAPAPQETKKTTEAPVRWADLEDEASEEPSALSEDKGAPELGVE
NLKIDESKKINKFLDEPEDSNIKAVTAGETPYTSAFTFEELNLSPELLKGLYVEMKFEKP
SKIQAISLPMILTPPHLDLIAQAHNGSGKTTCFTLGMLSRVDPNLKAPQALCICPTRELA
IQNLEVLRKMGKHTGITSECAIPMDSSNYIPINKRAPVIAQVVIGTPGTIKKWMSAKKLG
VSNVKILVFDEADHMLAEDGFKDDSLRIMRDIEKMSSHCQVLLFSATFSDTVKNFVSKIV
KRDHNQLFVKKEELSLESVKQYKVNVPDELSKVLVIKDRILEFGERLGQTIIFVRTRNSA
SMLHKALVEFGYDVTTIQGALNQAERDKIVKEFKDGLTQVLISTDLLARGFDQQQVNLVI
NYDLPVKHDNRVEPDCEVYLHRIGRAGRFGRKGAVFNLLCGDMDQMIISKIENHFDSKIA
EVPDWRNEEDFKAALRSAGLL
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaccgcctctaactccgccccttccaccactaccaccgccgaggcgccagcg
cctcaagaaaccaaaaagaccaccgaggcaccagtaagatgggccgatttggaagacgaa
gcttcggaagaaccgagtgctttatcggaagacaaaggtgcgccggaactcggagttgaa
aacctaaaaatcgatgagagcaaaaagatcaacaagttcctcgacgaacccgaggactcc
aacatcaaagccgtcacagctggggagacaccatacacttcagcatttacgtttgaggaa
ttgaatctgtcccctgaattgttaaaagggctatatgttgagatgaaatttgaaaagcct
agcaaaatccaagctattagtttaccgatgattttgacgcctcctcacttggatttaatt
gctcaagctcacaatggttctggtaaaaccacttgctttactcttggaatgctgtctcgt
gttgatccgaatctaaaagctcctcaagcactttgcatttgtcctactagagaactggct
attcagaatttggaagtgcttaggaagatggggaagcatactgggataacatcagaatgt
gctattccaatggatagttccaattatattccaattaataaacgggcacccgttatcgct
caagtagttattggtactcctggcactattaagaagtggatgtcagcaaagaaattgggt
gtgagtaatgtgaagattcttgtgtttgatgaagctgatcacatgctggctgaggatggt
tttaaagatgactccttgagaataatgagggatattgaaaagatgagttctcactgccag
gttcttctgttttctgccacatttagcgacactgtgaagaattttgtctcaaagatagtc
aagagagatcacaatcaactttttgtcaagaaggaagaactatctttggagtctgtgaag
caatacaaggtgaatgttccagatgaactttccaaagttttggtgattaaagatagaatt
ttagaatttggagagcgcctagggcagactataatatttgtacgcacaaggaatagcgca
agcatgttgcataaagcacttgttgagtttggttatgatgttaccacaattcaaggtgct
ctcaatcaagctgaacgagacaagatagtcaaagaatttaaagatggtttgactcaagtg
ctcatttcaacggacctccttgcccggggttttgaccaacaacaggttaatttggtcatc
aactatgatcttcctgtaaaacacgacaaccgtgtggagcctgattgtgaggtttacttg
catagaattggcagagcaggacgttttggccgcaagggagccgtgttcaacttactctgt
ggtgatatggaccaaatgataatatccaaaatcgaaaatcattttgacagcaaaatagca
gaggttcctgactggaggaatgaggaagactttaaagctgctctccgatcagccggttta
ttatga
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