Gossypium raimondii: 105767835
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Entry
105767835 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105767835 isoform X2
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
gra
Gossypium raimondii
Pathway
gra03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105767835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gra03036
]
105767835
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
105767835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_2nd_NFRKB
Motif
Other DBs
NCBI-GeneID:
105767835
NCBI-ProteinID:
XP_012442859
UniProt:
A0A0D2THB1
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Position
5:complement(7504186..7509502)
Genome browser
AA seq
1331 aa
AA seq
DB search
MMAIEKNNFKVSRFDSEFSYGSRETTVSSDEDELQRQSSAVDCDGDDDDDDEFDDADSGA
GSDDFDLLELGETGAEFCQVGNLTCSVPLELYDLPGLEDILSLDVWNECLSDEERFSLTK
FLPDMDQDTFMRTLNDLLKGDNFHFGSPIKKLFNMLKGGLCEPRVALYREGLNFFQKRQH
YHHLRKHQNNMVANLCQIRDAWLKCRGYGIEERLRVLNIMRSQKSLVYEKLEDEDSESSK
REDLDDGLWSKKVKDRKASQKKAHYSGYGVEPNLEFISRGQLMALEPAKYGKQNPKGMLK
TGTLPRQKYESGAVLRSRDWIRLDDDAEDPMFGAGIQRDRNVVRDSIMGKSGSLRARKKY
ERLEEFAGDSSAALPLSSKHDLQAHGRNRNMNKLSEAKMYTSKPPNRRSDDLPKKVKYTE
NHLQFAVGKQIKSSKGRTPPFPLKGSRVDLSECAEMFCQNKNHGEDISVDSSVRSDDWNV
RSKKWKTGRDSPDVSFKSYKVSSPLMNDRFLQSDSRIKPSQEKIRGNYVQKRGPVSKGNR
AFIRNEETESDSSEQFDNDEDSNPLMRSKLAYPTGIIKDSQLSSLKSGVDSKRTKSLKKN
SMEDGWTVDGITRFSKKSFREDVHVPGVENYYFKGKQKGKMSKSPLLNSTSRVMDEVDRK
QVYKLGKSAQLRGEPGNRLHKSSSRVYPTDKRQKGELAYDHSTSQTNYLRDYLVDEEDAL
PVTLLLADENNPGRNRKKGQSIEAYDRCEKSEASLRGCNKGTKKRKGKEYVAHVDRRGKD
GNLQSNLEQQIDDSLFLKKKGKRKLEADIGTSDMEASEPHGAELGTIDVEIETKPQKKPF
TLITPTVHAGFSFSIIHLLSAVRLAMITPLPEDSLEVSKPREEQNGKQEGGANGVLSCEN
AVSNDLDHPVQASALSLTVHEIVSRVAANPGDPCILETQEPLQDLVRGVLKIFSSKTAPL
GAKGWKALVAYEKSTKGWSWVGPVMHSSNDHETIEEVTSPEAWGLPPKMLVKLVDSFANW
LKNGQETLQLLGSLPAPPLELMQANLDEKERFRDLRAQKSLSTISPSSEEVRAYFRREEL
LRYSIPDRAFSYTAADGKKSIVAPLRRCGGKPTSKARDHFMLKRDRPPHVTILCIVRDAA
ARLPGSIGTRADVCTLIRDSQYIVEEVSDAQVNQVVSGALDRLHYERDPCVQFDGERKLW
VYLHREREEEDFEDDGTSSTKKWKRQKKDTAEQPDQGAVTVAFHGTGDQSGFDLVSDLNV
EPPCCDKKMETDSHNRQNVEDNADTSHGSEQGNTQQHGHPMQESKLLCQENSTNEDFDQH
FSFAGQSPPRG
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgattgagaagaataacttcaaagtttcacggtttgattcggagttctcgtat
ggtagtagagagacgactgtgtcgagtgatgaggatgagcttcaacgtcaaagctcagct
gttgattgtgatggcgatgatgatgatgatgatgaatttgatgatgctgattcaggagca
ggttcggatgactttgatttattggaattaggagaaacgggggctgaattctgccaagtt
gggaacttgacttgttctgttcctttggagttgtacgatcttcctggattggaagatatt
ttgtctcttgatgtgtggaatgagtgtttaagtgatgaggagcggtttagccttactaaa
tttttgcccgatatggatcaggatacatttatgcggactttgaatgaccttcttaagggt
gataattttcattttgggagtcctataaagaagttgtttaatatgttgaaaggaggctta
tgtgagccaagggtcgcactttatcgggagggtttgaatttctttcagaagcgacagcat
taccatcatttgaggaagcatcagaataatatggttgccaatctttgtcaaataagggat
gcttggcttaagtgtaggggatacggtatcgaggagcggcttcgtgttttgaacattatg
agaagtcagaagagtttggtgtatgaaaaattagaagatgaggattctgaatcctccaaa
agagaggatttggatgatggattgtggagcaaaaaggtgaaggacaggaaagcttcacag
aaaaaggcacactactcgggctatggggttgaaccgaatttagaattcatttcccgagga
cagctgatggctttggaaccagcaaaatatgggaagcagaatccaaaaggtatgcttaag
acaggaactcttcctcgacagaaatatgagtcaggggctgtactcaggtctagggattgg
ataaggttagatgatgatgccgaagacccaatgtttggagcaggtattcaaagagaccga
aatgttgtgcgtgatagcatcatgggaaaatctggttcattgagagcaaggaaaaagtat
gaaagactggaagaatttgctggtgatagttctgcggctttgcctttgtcttcaaagcat
gacttgcaggcccatggtaggaacaggaatatgaataaattgtcagaggcaaaaatgtat
acttcaaagccacctaacaggagatctgatgatttgcccaagaaggtcaagtatactgaa
aaccatctgcaatttgctgttggaaaacaaattaaatcttcgaagggccgaactcctcca
tttccattgaaagggagtcgagttgacttatctgaatgtgctgaaatgttttgtcaaaat
aagaaccatggagaagatatctctgtggattcttcagttagatctgatgattggaatgtt
aggagcaagaaatggaaaacaggacgagattctccagatgtcagttttaaatcttataaa
gtttcttcaccactgatgaatgatcgattcttgcagtctgacagtagaataaaaccttcg
caggagaagatcagagggaactatgtgcaaaagagaggccctgtttccaaaggcaataga
gcatttattagaaatgaagaaacagaatctgactcatctgagcaatttgataatgacgag
gatagcaatcctctaatgagaagcaaattggcataccctactggtatcataaaagattct
cagttgtcttcattgaagtctggtgtagattctaaaaggaccaaatctttgaagaaaaat
tctatggaggatggatggactgttgatggaatcactcgcttctccaagaagagctttagg
gaagatgtgcatgtgccaggagtagaaaactactattttaaaggaaaacagaagggcaag
atgagtaaaagccccttgcttaactctacttctagagtaatggacgaggttgataggaaa
caagtttacaagttgggtaaaagtgcccagttacgaggggaacctggtaacaggttacac
aagtcctcatctagggtctaccctactgacaaaaggcagaaaggtgaactcgcctatgat
cattctacgtctcagacaaattatctgcgtgattatcttgttgatgaggaggatgcttta
cctgtgacactcttgttagctgatgaaaataacccgggtagaaataggaagaaaggccag
agcattgaagcatatgatcgctgtgaaaaatctgaagcttcattacgagggtgcaacaaa
gggacaaagaagaggaaggggaaggagtatgtggcacatgttgatagaaggggcaaagat
ggtaacctgcagtctaaccttgagcagcaaatcgatgattcccttttcttgaagaaaaag
ggaaaacgaaaactggaggctgatattggtacttctgatatggaagcttctgaaccacat
ggtgcagaattaggaaccatagacgtggagatagaaaccaaaccacagaaaaagccattt
actttgatcacccccacagttcatgctggtttctcgttctcaattatacatcttctttct
gcagttcgcttggcaatgattacaccacttccagaagattccttagaggttagcaagcct
agagaagagcaaaatggaaagcaggaaggtggtgcgaatggggttctttcttgtgaaaat
gcagttagcaatgatttggaccatcctgtgcaagcaagtgcgctttctctaactgttcat
gagattgttagtcgggtggcggcgaatcctggggatccatgtatccttgagacacaagag
ccgcttcaagatttagttcggggagttctgaaaattttctcatcaaaaacagcacctttg
ggagcgaaaggctggaaggcacttgttgcctatgagaagtccacaaaaggttggtcttgg
gttggtcctgttatgcatagctcaaatgatcatgagactattgaggaggtaacatcaccc
gaagcctggggtctgcccccgaaaatgcttgtcaagttagttgattcatttgcaaattgg
ctaaaaaatggtcaggagactctccagctattagggagtcttcctgcaccaccgcttgaa
ttgatgcaagccaatttagatgagaaagaaaggttcagagacctaagagctcagaagagc
cttagcaccattagtccaagttctgaagaagtgagagcttatttccgtagggaggagctt
cttaggtattctattcctgacagggccttctcttacacggctgctgatggcaaaaaatct
atagttgctcccttgcgaaggtgtggaggtaaaccaacttcaaaggctcgagatcatttt
atgctgaaacgtgaccggccaccacatgttacaattctttgtattgtgagagatgcagct
gccagattgcctggaagtatcggcacccgtgcagatgtttgtactttgataagagactct
cagtacattgttgaagaagtttctgatgcccaagttaaccaggttgttagtggggcctta
gaccgtttgcattatgaacgtgatccttgtgtacagtttgatggagagaggaaattgtgg
gtttatttgcatagagaaagagaagaagaggattttgaggatgatggtacttcatctact
aagaaatggaagaggcagaaaaaagatactgctgagcaacctgatcaaggagccgtaact
gtggcttttcatgggactggggatcaatcaggatttgatttggtctctgatcttaatgtc
gagcctccatgctgtgataaaaagatggagacagattcccataatagacaaaacgtggag
gataatgctgacaccagtcatgggtctgagcaaggtaacacccaacaacatggtcatcct
atgcaagaaagcaaattgctatgtcaagaaaattccactaatgaagattttgatcaacat
ttcagttttgcaggtcagagtccaccgagagggtag
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