Gossypium raimondii: 105767927
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Entry
105767927 CDS
T04129
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
gra
Gossypium raimondii
Pathway
gra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105767927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105767927
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105767927
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
105767927
NCBI-ProteinID:
XP_012442984
UniProt:
A0A0D2TN59
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Position
5:complement(7944017..7947144)
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AA seq
256 aa
AA seq
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MAAKPGSAPVTYSPNLGQKTRPPIFKDNDLDWVRPDGRGFHQCRPAFFRTGAVNSASGSA
YAELGSTKVIVSVFGPRESKKAMMYSDTGRLNCNVSYTTFATPVRGQGSDHKEFSSMLHK
ALEGAIMLETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVAAVSVSCL
GKNLVIDPVLEEESYQDGSLMLTCMPSRYEVTQLTFTGEWSTPDINEAMQLCLDACNKLG
KVMRTCLKEAASGSQE
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggccgcaaagcccggttcagctccggtaacgtattcgccgaatcttggccaaaaaact
cgcccccctattttcaaagacaacgatctcgattgggtccgacctgatggccgtggcttc
caccagtgccgaccagcatttttcaggacaggtgcagtaaattctgcttccggatctgct
tatgcagagcttgggagtaccaaagtcattgtatctgtatttgggccaagagaaagtaag
aaagcaatgatgtacagtgatactgggagattaaattgtaatgtcagctatacaacattt
gccactccagttcgaggacagggatcggatcacaaagagttttcgtcaatgcttcataaa
gctttggaaggtgcaataatgttggaaacattccccaagaccactgtggatgtttttgca
ttggtgttggaatctgggggcagtgatcttcctgtggtgatatcatgtgctagtcttgcc
cttgcagatgcggggatcatgatgtatgaccttgttgctgcagtttctgtgtcctgtcta
gggaaaaaccttgtgattgatcctgttctcgaagaggaaagctaccaagatggaagctta
atgcttacatgtatgccttctcgttatgaggtcactcaactaacatttacaggagaatgg
tcaaccccagatattaatgaggcaatgcagctttgccttgatgcttgcaataagcttggt
aaagtgatgaggacatgcttgaaggaagccgcgtctggctcacaagagtag
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