Gossypium raimondii: 105768014
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Entry
105768014 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105768014
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gra03041
]
105768014
03036 Chromosome and associated proteins [BR:
gra03036
]
105768014
Spliceosome [BR:
gra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
105768014
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
105768014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
U3_assoc_6
HAT_Syf1_M
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
105768014
NCBI-ProteinID:
XP_012443154
UniProt:
A0A0D2RYM1
LinkDB
All DBs
Position
5:8405853..8415490
Genome browser
AA seq
831 aa
AA seq
DB search
MEEFEKPQVSMEEDTEMEESDAVENPKASQKSSSDSESSDSEEEADQNEQLLALEYELST
NPSNYDAHVQYIKLLRRSAEIEKLREARENMNTLFPLSPEMWMEWAKDEASLSNESNFES
VEKLYERGISEYLSIPLWCEYLNYVQEHDPKVRDCLADGISKARNLFERAVTAAALHVSQ
GSQIWDAYIQYEQAILLTIDQSDIQAKEKQVQRIRSIFHRYLSIPLASLKSTLLAYKAWE
VEQGNSLDAEPGDVLGISSHVASGYQKAEEMYNARAHHEEQITRQDISESERFQHYMSYL
DFEKSFGDPARVQILYERAITDFPVSNDLWLHYTHYLDKTLKVGNVVKDVYSRATRNCPW
VGELWVRYLLCLERGLAFEKEISAAFEKSLKCTFSTLEEYLDLFLTRVDGLRRRISSASG
DGVLNYSMIRESFQQAADYLSPHMKNTDGLLHLHAYWARLELKLGNDLIAARGVWESLLK
TCGSMLEAWKSYIAMEIELDHINEARAIYKRCYSKRFSGTGSEDICHSWLRFEREFGTLE
DLNHAVQKVTPRLEELQLFRLQQESKSFTGAIDQREQTLKNTSRERRKPGSSAIDEQPPA
KWQKYTSQNKKLHKRENTQGLNLAEANDGEEKEGKVEKKVNEKQMKDTKNTTSRLYKDQC
TAFVSNLNITAKDEDLHQFFSDVGGVTAIRILHDKFTGKSRGLAYVDFKDDEHLAAAVAK
NKQMFLGKKLSVARSNPKQGKRESLAHTAPGEEASNQSGGHGRSVSKESGEDSKGSRGRK
RIENIQLKGKNTFAVPRNVKPLGWTNKPGTREEEDEKPKSNDEFRKMFMKT
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtttgagaaaccacaagtttccatggaagaagacactgaaatggaggagagc
gatgctgttgaaaaccctaaagccagtcagaaatccagcagcgattcggagtcaagcgat
tcagaagaggaagcagatcagaatgaacagctcttagccctagaatacgagctctccacc
aatccttccaactacgatgcacatgttcagtacataaagcttttgaggagaagtgctgaa
atagagaaactaagagaagcaagggaaaacatgaatacgttgtttccattgagtcctgaa
atgtggatggaatgggccaaagacgaagcttctctttctaatgagtccaatttcgagtca
gtcgagaagctttacgagagaggcatctctgagtatctgtctatccccctttggtgtgag
tacctaaattatgtgcaagaacatgatccaaaagtgcgtgattgtttagctgatggaatt
tcaaaggcaagaaatctgtttgagcgagctgttactgccgctgctcttcatgtttctcaa
ggatctcaaatatgggatgcatatatccaatacgagcaagctattttactaactattgac
caatctgacatccaggctaaagagaaacaggtccagcgcatacggagtatattccatcga
tacttgtctattccccttgctagcttgaagtctactcttctagcctacaaggcatgggag
gtggagcaaggaaattcccttgatgctgaacctggcgatgttttagggatttcttcccat
gttgcttcgggttaccagaaggcagaggagatgtacaatgctcgtgcacatcatgaagaa
cagattactagacaggatatatctgagtctgaaaggtttcagcattacatgagctacttg
gattttgaaaaatcttttggtgatccagcccgagttcaaattctgtatgaacgtgccata
actgactttcctgtatcaaatgatctctggcttcactatactcactatcttgataaaacc
ttgaaggtgggaaatgttgtgaaggatgtttattccagggctacaagaaactgtccctgg
gttggagaactttgggttcgctatttgctgtgtctggagcgtggccttgcttttgagaaa
gagatatctgctgcctttgagaagtcccttaaatgcacattttcaacccttgaggagtac
ctcgatttgttcctcacccgagtagatggcttgagacgtagaatttcatcagctagtgga
gatggtgtgttgaactattcaatgattagggaatcttttcagcaagcagcagattactta
tcaccacacatgaagaacactgatggtttactgcatttgcatgcctattgggcccgttta
gagctgaaattgggcaacgatttaattgcagctcgtggtgtttgggagagcttgcttaaa
acttgtggttcaatgttggaagcatggaaaagttatatagcaatggaaattgaattagat
catataaatgaagccagggccatatataagagatgctacagcaaaagatttagtggaacg
ggttcagaggacatctgccattcttggttgcgctttgagagggaatttggaacactggaa
gacctcaaccatgctgtgcaaaaggttactcctcgtcttgaggagctgcaattatttagg
ttacaacaggaatctaaatctttcactggagcaatagatcaaagagagcagacccttaag
aacacatctcgtgagaggaggaaaccaggttcaagtgcaattgatgagcagcctccagct
aagtggcaaaaatatacttctcaaaataagaaattgcacaagagagagaacacacaaggg
ctgaacttagctgaagcaaatgatggggaagagaaagaaggcaaggttgagaaaaaggta
aatgagaagcagatgaaagacactaagaatactacatcaagattatataaagatcagtgc
actgcatttgtatcaaatcttaacattacggcaaaagacgaagatctccatcaattcttc
agtgatgttggtggggtcaccgcaattcgaattctgcatgacaagttcactggaaaatca
aggggactggcatatgtggattttaaggatgatgaacaccttgctgcagctgtagcgaag
aataagcaaatgtttcttggaaagaagttgagtgttgcacggtcaaatccaaagcagggc
aagagagaatcccttgctcatactgcacctggtgaagaagctagtaatcaaagtggaggc
cacgggagatctgtatctaaagaatctggtgaagattcaaagggatctagaggtcgtaag
cgcattgagaacatccagctcaaagggaagaacacatttgcagtgccaagaaatgttaaa
ccacttggatggactaacaaacctggaacccgggaagaggaagatgagaagccaaaatca
aatgatgagttcagaaaaatgtttatgaaaacctga
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