Gossypium raimondii: 105768015
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Entry
105768015 CDS
T04129
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
gra
Gossypium raimondii
Pathway
gra04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105768015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105768015
03009 Ribosome biogenesis [BR:
gra03009
]
105768015
04131 Membrane trafficking [BR:
gra04131
]
105768015
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105768015
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
105768015
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
105768015
Membrane trafficking [BR:
gra04131
]
SNARE
SNARE associated proteins
Others
105768015
Autophagy
Aggrephagy
Other aggrephagy associated proteins
105768015
Exosome [BR:
gra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105768015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_22
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_17
AAA_18
Parvo_NS1
IstB_IS21
Viral_helicase1
ABC_tran
AAA_lid_PRS2_C
AAA_7
NACHT
NB-ARC
AAA_24
TsaE
DUF815
Zeta_toxin
Sigma54_activat
Vps4_C
Sigma54_activ_2
Zot
Phage_Mu_Gp48
Motif
Other DBs
NCBI-GeneID:
105768015
NCBI-ProteinID:
XP_012443155
UniProt:
A0A0D2SGW7
LinkDB
All DBs
Position
4:complement(15882060..15886698)
Genome browser
AA seq
805 aa
AA seq
DB search
MSNQAESSDSKGAKKDFSTAILERKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGD
TILIKGKKRKDTICIALADDTCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVH
ILPVDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEYCV
VAPDTEIFCEGEPVKREDENRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLAEDVDLERISKETHGYVGADLAALCT
EAALQCIREKMDVIDLEDETIDAEILNSMAVSNEHFQTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPIAKEVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRSEN
PEAMEEDFEDEVAEIKPAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFAE
TGSRTAASDPFAAAAGGADEDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaagctgaatcctctgactcgaagggggctaagaaggattttagtacggcg
atcttggaaagaaagaaggcagcaaatcgactcgttgttgatgaggcaatcaacgatgat
aactctgttgtttctcttcatcctgataccatggaaaagctccagctgtttcgcggtgac
actattctcatcaagggaaagaagaggaaagatactatctgcattgctctggcagatgac
acatgtgatgaacctaagatcaggatgaataaggttgttaggtcaaacttgagagttagg
cttggtgatgttgtctctgtgcatcagtgtccagatgttaagtatggaaaacgtgtgcac
atcttgcctgtggatgacacaattgaaggggttactggaaatctctttgatgcttacctg
aaaccttactttctggaagcataccgcccagtgagaaagggtgatctcttccttgtgaga
gggggaatgagaagtgtagaattcaaggttattgagactgaccctccagagtattgtgtg
gtcgcaccagacactgagatattctgtgaaggagagcctgttaagagggaggatgagaat
agattagatgaggtgggttatgatgatgttggcggagtgagaaaacagatggctcagatt
cgggaactagtggagcttccattgaggcatccacagttatttaaatcaattggcgtgaag
ccacctaaaggaatcttgctttatggacctcctggatctggaaagactttgattgcccgt
gcagttgcaaatgaaactggtgctttctttttttgcatcaacggtcctgagatcatgtca
aaattggccggggagagtgaaagcaatcttagaaaagcttttgaggaagcagagaagaat
gcaccatctattatattcattgatgaaattgattcaattgctccaaagagagagaagaca
catggtgaagttgagaggagaattgtctctcagctgttgacattgatggatggtcttaaa
tcccgtgcacatgttattgttattggggccacaaatcgtcccaatagcattgatcctgct
cttagaaggtttggaagatttgatagggagattgatattggtgtccctgatgaagttggc
cgtcttgaggtgctccgtatccacaccaagaacatgaagctggctgaagatgttgattta
gaaagaatttccaaggagacacatggctatgttggtgctgatctcgcagctctctgtact
gaggcagcattacagtgcatcagggaaaagatggatgtgattgacttggaagatgagaca
atagatgctgagatactcaactctatggcagtctcaaatgagcacttccagactgctctt
ggaacaagcaatccatcagccctgcgtgaaactgttgttgaagtacctaatgtcagttgg
gaagatattggaggcctcgagaatgttaaaagggagcttcaagagactgttcaatatcct
gtggagcatcctgaaaagtttgagaagttcgggatgtcaccctcaaagggagtactattc
tatggccctccaggatgtgggaaaacccttctggccaaagctattgccaatgagtgtcag
gcaaacttcatcagtgtcaagggtccagaattactaacaatgtggttcggagagagtgag
gccaatgtgcgggaaatttttgacaaggctcgccagtctgctccttgtgtactgttcttt
gatgaacttgattcaattgctacccagagaggaagcagcgtgggtgatgcagggggggct
gctgatagggttttgaaccaacttcttactgaaatggatggcatgtctgccaagaaaact
gttttcatcattggagccaccaaccgacctgatattatagatccagcacttctgcgtcca
ggtcgtcttgatcagttgatctatattcctctccctgacgaggattctcgccaccagatt
tttaaggcttgcttgaggaaatcaccaattgcaaaagaggttgacctcagagctcttgcc
aaatatactcaagggtttagtggggctgatatcacagaaatttgccaacgagcatgtaaa
tatgccataagagaaaacattgaaaaggatattgagagagaaaggagaagaagtgagaac
cctgaagctatggaggaagattttgaggatgaagtggcagaaatcaagcctgcacatttt
gaggaatcaatgaagtttgctcgtaggagtgtgagcgatgctgacatccgcaaatatcaa
gcatttgctcaaacattgcagcagtcgaggggatttggaagtgaatttaggttcgctgaa
actggttccaggactgcagcctctgatccttttgctgctgctgctggaggagctgatgaa
gatgacctttacagttaa
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