Gossypium raimondii: 105768020
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Entry
105768020 CDS
T04129
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gra03036
]
105768020
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gra00535
]
105768020
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
105768020
Meiosis-specific proteins
Cohesin complex and associated proteins
105768020
Proteoglycans [BR:
gra00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
105768020
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
ATG14
Motif
Other DBs
NCBI-GeneID:
105768020
NCBI-ProteinID:
XP_052486877
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Position
5:complement(5917756..5936175)
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AA seq
1200 aa
AA seq
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MFIKQIIIEGFKSYREQIATEPFSPKVNCVVGANGSGKTNFFHAIRFVLSDLFQNLRSED
RHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTIGLKKDEYFLDGKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYTIYDKELQDARRKLE
EVEEARTKVSEKSSEMYNAVLDSHERFKDLDKKSKDLMKELQGLNKDKEALETKQAEAIK
KQTALELDVKDLEERMSGNMQAKEDAVKQLRMLQKEIQESTEELNRIKPLYDNQLKKEEN
ITKGIMEREKQLSILYQKQGRATQFSSKAARDKWLQKEIDDLEQVLYSNSSQEQKLQEEI
FGLNEELERLDESIVRRKTEIKELESSIAKSRFNSQKTERDKLQDERKSLWEKESKLSAE
IDKLKAEVEKAEKSLDHATPGDVRRGLNSIRKICREYNIGGVFGPIIELLNCDEKFFTAV
EVTAGNSLFHVVVEKDEISTQIIRHLNSLKGGRVTFIPLNRVKAPHVTYPQSSDVIPLLK
KLNFSSKYAPAFAQVFGRTVICRDIDVATRVARTDGLDCITLEGDQVSKKGGMTGGFYDY
RRSKLKFMNIITQNTMSINKKEEELKGIGLELQKLEQKITAFVTEQQQLDAKRVLDKSVL
EQHKQDIANANKQKQYTSKALENKRKSLADVQMQIDQLRASMAMKRAEMGTELIDHLTPE
EKDLLSRLNPEITDLKEQLINCRSDRIETESRKAELETNLTTNLKRQKQELEAIISAAEA
DALLDEAESKRQELMDANLLVDDATQQLKRVSDRIDELTKQLRGIKDEKNNLKGLEDAYE
RTLQDEAKELEQLLSKRSNLLAKQEEYSKKIRELGPLSSDAFEMYKRKQIKELQKMLHRC
NEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDSGDEKIKELIEVLDQRKDESIERT
FKGVARHFREVFSELVQGGHGHLVMMKKKDGDDDDDDDDGPREADLEGRVEKYIGVKVKV
SFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGNMI
RRLADMANTQFITTTFRPELVKVADHIYGVTHKNRVSRVNVVSKEDALDFIEHDQSHNAE
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgtttataaaacagatcattatcgaagggttcaaaagctacagggagcagattgctacc
gagcctttcagcccaaaagttaattgtgttgttggtgctaatggttctggcaaaacaaat
tttttccatgcaattcgttttgttttgagcgacctcttccagaatctgcgcagtgaagat
aggcatgcactactacatgaaggtgcaggacaccaggttttgtctgcatttgtggagatt
gtttttgataattctgacaatcgtatcccggttgacaaggaggaggtacgcctacgtcga
acaattgggttgaagaaggatgagtatttcttggatggaaagcatattacgaaaactgaa
gttatgaatttactggaaagcgctgggttctctcgttctaatccttattatgttgtgcaa
caaggcaagatagcatcattaacgttgatgaaagattctgagaggctggacttgctgaaa
gaaattggtggtactcgagtttatgaagagagacgccgtgaaagcttgaaaatcatgcag
gaaactggcaataaaaggaagcaaataatacaagttgttcagtacttagatgagagatta
aaagaactggatgaagagaaagaagagcttagaaaatatcagcagcttgacaagcagaga
aagtctctagaatacaccatttatgataaagaacttcaagatgctcggcgtaaattggaa
gaggtagaagaagctcgaaccaaggtttctgaaaaatcatctgagatgtataatgctgtg
ctggattcccatgaaaggttcaaggacttagacaagaagtctaaagatctaatgaaggag
cttcaaggtttaaacaaagataaagaagccttagaaactaaacaagcagaagctataaag
aagcagactgcgctagagcttgatgtaaaagatttagaagagaggatgtctgggaacatg
caagctaaagaggatgcagtcaaacagcttcgaatgctgcagaaggagatacaggagtca
acagaggagcttaacaggattaaaccactctatgacaaccaattaaaaaaggaggagaat
ataacaaaagggattatggagcgtgaaaagcagcttagcattctttatcagaaacaaggt
cgtgctactcagttttccagtaaagctgctcgtgataaatggcttcaaaaggaaattgat
gatttggaacaagtgctttattcaaattcatcacaggagcaaaaactccaggaggaaatt
tttgggcttaatgaggaattggagcgattggatgaatccattgtaagacgcaaaactgaa
atcaaagagttggaatcttcaattgccaagtcccggtttaattctcagaaaactgaaaga
gataagctgcaggatgaaaggaagtccttatgggaaaaagaaagtaaactttctgctgaa
attgataagctgaaagcagaagttgagaaagcagaaaagagccttgatcatgcaactcct
ggagatgtaagaagagggctgaattctattaggaagatatgcagagaatataatattggt
ggagtgtttggtccaattattgagctgcttaattgtgatgagaagttttttactgcagtt
gaagtaactgctggaaacagtttgtttcacgtggttgttgaaaaggatgagatatcaacc
cagataattcgacatcttaattcactgaaaggaggacgtgttacttttataccactaaac
cgcgtgaaggctccacatgttacatatccacaaagttctgacgtgatacctctgttaaag
aaattgaacttttcttccaaatatgctccagcatttgcacaggtgtttggtagaacagta
atctgccgagatatagatgtggctacaagagttgctcgaactgatggtctggattgcata
actttggaaggtgatcaagttagcaagaagggtggtatgactgggggattttatgattat
aggcgctcaaaattaaagttcatgaatataatcacgcaaaacacgatgtctattaataag
aaggaagaagaactgaaaggaatcggcttagagcttcaaaagttagagcagaaaatcaca
gcttttgtcactgaacagcagcaacttgatgctaagcgggttcttgataaatcagtgctg
gagcagcataagcaggacattgctaatgctaataagcaaaaacagtatacatctaaagct
cttgaaaataagagaaaatcacttgcagatgtgcagatgcaaattgatcagcttagagct
agtatggcaatgaaacgtgctgaaatgggcacagagcttattgatcacttaacaccagaa
gagaaggaccttttgtcgagattgaaccctgagataacagatcttaaagagcaacttatc
aattgcaggagtgatcgtattgagactgaatcaagaaaagcagaacttgagacgaatctc
acaacaaaccttaagaggcaaaagcaagagttggaagcaataatatctgcggcagaggct
gatgcattgcttgatgaagctgaatcaaagaggcaggaattaatggatgctaatttgttg
gttgacgatgctacacagcaacttaaaagagtttctgatagaattgatgagctaacaaag
caacttaggggaatcaaggatgaaaagaacaatctgaagggattggaagatgcctatgag
aggacacttcaggatgaagcaaaagagttggagcaattgctaagtaaaaggagtaatctt
cttgctaagcaggaggagtactccaagaaaataagggagttgggccctttgtcatcagac
gcttttgaaatgtacaagcgaaagcagataaaagagttgcagaaaatgcttcataggtgc
aatgagcagctgcaacagttcagccatgtaaacaagaaagcacttgaccagtatgtaaat
ttcactgagcaaagagaagaactgcagaaaaggcaggcagagctggattcaggtgatgag
aaaattaaagaacttatagaagttctagatcagcgcaaggatgagtcaatagaacgaact
ttcaaaggtgttgcccggcactttagagaagtattctcagaacttgtacaaggtggtcat
ggtcatttggtgatgatgaagaaaaaggatggtgatgatgatgatgatgatgatgatgga
cctcgagaggcagatttggagggaagagttgagaaatacattggtgtgaaagtgaaggtt
tcctttaccgggcaaggtgagacacaatcaatgaagcaattatcaggaggacagaaaact
gttgtagcccttacattaattttcgcgattcaacgatgtgatccggctccattttatctt
tttgatgagatagatgcagctctggatcctcagtaccggactgcagttggaaatatgatt
cgtcgactggcagacatggcaaatacacaattcataaccaccacatttcggccagagctt
gtcaaagttgctgatcatatatatggtgtgacacataaaaacagggtgagccgtgttaat
gttgtctccaaggaagatgcgttagattttattgagcacgatcagtctcacaatgctgaa
taa
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