Gossypium raimondii: 105768021
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Entry
105768021 CDS
T04129
Name
(RefSeq) ubiquitin C-terminal hydrolase 13 isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
gra
Gossypium raimondii
Pathway
gra03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
105768021
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gra01002
]
105768021
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gra04121
]
105768021
Enzymes [BR:
gra01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
105768021
Peptidases and inhibitors [BR:
gra01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
105768021
Ubiquitin system [BR:
gra04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
105768021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
Nitroreductase
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
105768021
NCBI-ProteinID:
XP_012443165
UniProt:
A0A0D2TLR0
LinkDB
All DBs
Position
5:5940284..5959047
Genome browser
AA seq
1116 aa
AA seq
DB search
MTVMTPSPIDQQEDEEMLVPHSDLTDNHQPMEVVSQAENANTVENQPVEDPPSSRFTWKI
DNFSRLNTKKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVADSASLPYGWSRYAQFS
LAVVNQIHSKYSIRKDTQHQFNARESDWGFTSFMPLGELYDPCRGYLVNDTFVVEAEVVV
RKIVDYWAYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDMPSGS
IPLALQSLFYKLQYSDSSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTV
VEGTIQQLFEGHHMNYIECINVDYKSTRKESFYDLQLDVKGCRDVYASFDKYVEVERLEG
DNKYQAEQYGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDR
DDGKYLSPEADRSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSDQWYKFDDERVTKEDM
KKALEEQYGGEELPQTNPGFNNTPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIAEHL
RERLKKEQEEKEHKKKEKAEAHLYTIIKVARDDDLAEQIGKGICFDLVDHDKVRSFHIQK
QMPFNVFKEEVAREFGIPVQFQRFWLWAKRQNHTYRPNRPLTPLEETQSVGALKEVSNKV
HNAELKLFLEVELGLDLRPIAPPYKTKEDILLFFKHYDPEKEELRYVGRLFVKSAGKPTE
ILSRLNKMAGYAPDEDINLYEEIKFEPSVMCEPIDKKITFRASQLEDGDIVCFQKPLPVE
STNQYRYPDVPSFLEYVHNRQVVHFRSLEKPKEDDFCLEMSRLYTYDDVVERVAQQLGLD
NPSKIRLTSHNCYSQQPKPQPIKYRGVDHLSDMLFHYNQTSDILYFEVLDIPLPELQGLK
TLKVAFHHATKDEVVIHTIRLPKQSTVGDVINDLKTKVELSHPDAELRLLEVFYNKIYKI
FPPNEKIENINDQYWTLRAEEIPEEEKNLGPNDRLIHVYHFTKETAQNQMQILNFGEPFF
LVIHEGETLAEIKVRIQRKLQVPDEEFAKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVYG
AWEQYLGLEHSDNIPKRAYAINQNRHTFEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatgactccttcacccatcgatcaacaggaagacgaggaaatgctcgtgcca
cactctgatttgaccgacaatcaccagcccatggaagttgtatcacaagctgagaacgca
aataccgtggaaaatcaaccagtggaggatcctccttcgtcaagattcacttggaagatt
gataatttctctagattaaacaccaagaagcattattcagatgtttttgtagttggtggt
tataaatggcgaatactgatatttccaaagggtaacaatgtggatcatttgtccatgtat
ctggatgttgctgactcagcaagtttaccctatgggtggagtagatatgcgcagttcagc
ttggcagtagttaatcaaattcatagtaaatattcaatcagaaaagacacacaacaccag
tttaatgcaagagaaagtgattggggttttacatcctttatgccccttggtgagctatat
gatccttgcagagggtatcttgtgaatgacacttttgttgttgaagcagaggtcgttgtc
cgcaaaattgtggattactgggcatatgactcaaagaaggaaactggttatgtcggactt
aagaatcaaggagcaacatgttacatgaactctctgctccaaaccctgtatcatattcct
tacttcaggaaggcagtttatcatatgcctacaactgaaaacgatatgccatctggaagt
atccctcttgctctgcagagtttattttacaaactccagtacagtgacagtagtgttgca
acaaaagagctgaccaaatcttttggatgggacacatacgattctttcatgcagcatgat
gttcaagaacttaatagagttctatgtgaaaaactcgaagataaaatgaagggaactgtt
gtggagggcaccatacaacagttgtttgaagggcatcatatgaactacattgagtgcatt
aatgtggattataaatctacaaggaaggagtcattttatgacctacagcttgatgttaaa
ggctgtcgagatgtatatgcttcttttgacaagtatgttgaagttgaacggcttgaaggt
gataataagtatcaggctgagcaatatggattgcaggatgctaagaagggtgtgttgttc
attgatttccctccagtccttcaacttcagcttaaacgttttgaatatgattttatgcga
gatactatggtcaagattaatgaccgttatgagttccctttgcaacttgatcttgatcga
gatgatggaaaatacttatcaccagaagctgataggagtgttcggaatctttacacactt
cacagtgtccttgttcatagtggtggagtgcatggtggacattattatgcatatatcagg
ccgactctttctgatcagtggtacaaatttgatgatgaaagagtaaccaaagaagatatg
aaaaaggcattagaggagcagtatggtggggaagagttaccgcagacaaacccagggttc
aataatactccttttaaatttaccaaatattcaaatgcatacatgctggtgtatatacgt
gaaagcgacaaagacaagataatatgtaatgtagatgagaaggatatcgcagaacatctt
agggagagattgaagaaagaacaagaagagaaagagcataaaaagaaggagaaggcagag
gcacatctttacactattataaaggttgctcgagatgatgatcttgcagagcagattggg
aaaggtatatgttttgatcttgtggatcatgataaagtcaggagttttcatattcagaag
cagatgcctttcaatgtgtttaaggaagaggttgctagagagtttggcataccagtgcaa
tttcagcgattctggttgtgggccaagcgtcaaaaccatacctaccgtccaaaccgacca
ttgacacctttggaggaaacacaatctgttggagccttgaaggaggtatcaaataaggtt
cacaacgcagaactaaagttgttcctggaagttgagcttggactggatttacgcccaatt
gcgccaccatataagacaaaggaagatattttacttttcttcaagcactatgatcctgag
aaagaagagcttcgctacgttggaaggctgttcgtgaaaagtgcaggcaagccaacagaa
attttgtccagattaaacaaaatggcagggtatgctcctgatgaagatatcaatctttac
gaggaaataaagtttgagcccagtgttatgtgtgaaccaattgacaagaaaatcacgttt
cgtgctagccagcttgaggatggtgacattgtttgctttcaaaagcctctccctgttgaa
agtactaatcaataccgctatcctgatgttccttcatttctggaatacgtgcataatcgc
caggttgtacactttcggtctctggaaaaacccaaggaagatgatttctgtctggagatg
tcaaggctttatacttatgatgatgttgttgagagagtagctcagcaacttggtttggat
aatccatcaaaaatcaggcttacatcacacaactgttactcccagcagcccaaacctcag
cctattaagtatcgtggagtggatcatttgtctgacatgctgttccactacaatcagaca
tctgatattttatactttgaagtattagacatccctctgccagaactgcaaggtttgaaa
acgctgaaggtagcatttcatcatgctacaaaagatgaagttgttatccatactattagg
cttccaaaacagagcactgttggtgatgtgattaatgatcttaagacaaaagtggagttg
tctcatcctgatgcagaattgagattgcttgaagttttctataacaagatctacaagatt
ttcccacccaatgagaagattgagaatataaatgaccaatactggacactacgagcagaa
gagataccagaggaagagaaaaatcttggtccaaatgatcgcctaattcatgtataccac
tttacaaaggaaacagctcagaaccagatgcaaattctgaattttggagaaccctttttc
ttggtgattcatgaaggtgagactttggccgaaataaaagtccgtatacagaggaagctg
caagttcccgatgaggagtttgctaagtggaagtttgcattcctctcacttggtcggcca
gagtaccttcaagattctgatattgtatctagtcgttttcagagaagagatgtttacggt
gcttgggagcagtatcttgggttggagcactctgacaatattcctaaaagagcttatgca
attaatcagaaccgacacacttttgagaagccagtaaaaatctacaattag
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integrated database retrieval system
