Gossypium raimondii: 105768066
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Entry
105768066 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105768066 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105768066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105768066
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105768066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
105768066
NCBI-ProteinID:
XP_012443238
UniProt:
A0A0D2TKT3
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Position
5:complement(4911692..4917580)
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AA seq
774 aa
AA seq
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MPRKVNCGIDYDDGYDDDFDDYDYGYDVEENVKEPSLQDTIKRGVWRCSVCTYDNDDTMS
SCDICGILRSPSVSNGTYDEKRTVHGICKVSGVSIMAKSLFASRPHQMSKKEVDSQQQND
DFVVKENNNFHMLGNNQGQFHEFHKAYSSPTHSRINIAPFKFDVPSPDDLVSNGLHSSAQ
HSKAKIFDFKSSRAPSRGVGKNEAVKVLSSAKSSDSSHDSTGKDKHDGIIFSKNLEINTS
SGFKASDKSSASMAKGRVEDSDGRSVSINLCSSGQSSSSLMPKERTDMVEDGSSLTHGGE
GHLTSNLKNMTLGAKSGNSKDIKANSRAQYKPEKWMFPEKAEGSLTQLNLAIVGHVDSGK
STLSGRLLHLLGRISRKEMHKYEKESKLQGKGSFAYAWALDESAEERERGVTMTVAVTYL
DSKRYHVVVLDSPGHKDFVPNMITGATQADAAILVIDASIGSFEAGMDGTKGQTREHAQL
IRSFGVDQIIVAVNKMDAVEYSKDRFDLIKSQLGTFLRSCDFKDSSVTWIPLSAVENQNL
VVAPSDLRLSWYHGPYLLDAIDSFQPSSRDFSKPLLMPICDVIKSSQGQVSACGKLEAGA
VRSGSKVLVMPSADIATVRSLERDSQTCSIARAGDNVAINLHGIDGNHVIAGGVLCHPDF
PVAFAKHLELKVLVVDGATPILMGSQLEFYAHHAKEAARVARISSLLDSKTGKVAKKAPR
CIVAKQSAVIELVLQESICIEMFSKCKALGRVFLRTLGRTVAVGVVTRIVEELV
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgaaaagttaattgtggaattgattatgatgatggttatgatgatgattttgat
gactacgactatggatatgatgtagaagaaaatgtgaaagaaccttctctgcaagacact
atcaaacgtggtgtgtggcgttgctccgtttgtacttatgataatgatgataccatgtca
tcatgtgatatttgtggcattcttcgcagtccatcagtcagtaatggcacctatgatgag
aagagaacagttcatggcatatgcaaagtttctggagtatctattatggccaagtctctt
ttcgcatcaaggccgcatcagatgtccaaaaaagaagtagattctcaacaacagaatgat
gattttgtggtgaaagagaacaataacttccacatgcttgggaataaccaaggacaattt
catgaatttcataaggcttatagttctcctacccattcccgtattaatatagcccctttt
aagtttgatgttccatctccagatgacttggtttccaatggtctgcattcatctgcacag
cattcaaaagccaagatttttgactttaaatcttccagagctccctctaggggggttggg
aagaatgaggcagttaaagtactatcaagtgctaaaagttcagatagctcacatgactca
acgggaaaagacaagcacgatgggattatcttctcaaagaatctagaaatcaatacatca
tcaggtttcaaagcttcagataaatcttctgcttcaatggcaaaaggcagagttgaagat
tcagatggaagaagtgtttctattaatttgtgttctagtggtcaaagctcatcatcattg
atgccaaaagaaagaactgatatggtggaagatggaagctctttaacgcatggaggtgag
ggacatctcactagtaatctgaaaaacatgactttgggtgctaaatctgggaactcaaaa
gatataaaagcaaattcacgtgcacagtataagcctgaaaagtggatgttccctgaaaaa
gcagaaggttcactgactcaactaaatcttgcaattgttgggcatgttgattctggaaaa
tcaacactctctggtagactgcttcaccttttgggacgaatatcccgaaaagaaatgcac
aaatatgaaaaggagtccaaattgcagggaaaaggatcctttgcttatgcttgggcattg
gatgagagtgcggaagaaagggaaaggggagtcaccatgactgtggctgtaacttatttg
gattcaaaaagatatcatgttgttgtccttgactccccagggcacaaagattttgttcca
aatatgataactggggcaacacaagctgatgctgcaattcttgttatagatgcctctatt
ggttcatttgaagctggtatggatggcacaaagggacagacaagggagcatgcacaactc
atcagaagttttggtgttgatcaaattatagttgcagttaacaagatggatgctgtagag
tactctaaggatcgatttgatttgataaaatcacagcttgggacatttctccgctcttgt
gactttaaggattcctcagtcacatggattccgctaagcgctgttgagaatcagaattta
gtagttgcaccttctgatcttcgtctatcctggtatcatggaccttatctattagatgca
attgattccttccagccttctagcagagatttttcaaagcccctacttatgcctatatgt
gatgttataaaatcttcacaagggcaggtgtctgcctgtggcaagttagaggctggagct
gttcgaagtggatcaaaggttttagtcatgccatctgcagatatagcaaccgtgcgttcc
ttagagcgtgattcccagacttgttcaattgcaagagctggagataatgtagctatcaac
ctgcacgggatagatggaaatcatgtgatagctggtggtgtgttgtgtcatcctgatttt
ccagttgcatttgcaaaacatttggagttgaaggtgcttgttgtggatggtgcaacacca
attttaatgggttctcagttggagttttatgcacaccatgcaaaggaagctgcaagagtt
gcaaggatatcatcattgcttgattcaaagactgggaaagtcgcaaagaaagcacctcgc
tgtattgttgctaagcagagtgcagttattgagttggttttgcaggaatcaatttgcatt
gaaatgttctcgaaatgtaaagcccttggaagggtgtttcttagaacattaggaagaaca
gttgctgtgggggtcgtgacccgaatagttgaggagctggtatag
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