Gossypium raimondii: 105768068
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Entry
105768068 CDS
T04129
Name
(RefSeq) cytoplasmic 60S subunit biogenesis factor REI1 homolog 1
KO
K14816
pre-60S factor REI1
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105768068
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
105768068
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_jaz
zf-met
C2H2-zf_KIN17
zf-C2H2_4
zf-C2H2
Zf-C2H2_ZNF451_2nd
Zn_SUZ12
SF3a60_Prp9_C
Motif
Other DBs
NCBI-GeneID:
105768068
NCBI-ProteinID:
XP_012443252
UniProt:
A0A0D2TKT0
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Position
5:4909438..4911615
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AA seq
407 aa
AA seq
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MPGLTCNACNKEFLDDADQKLHYKSDWHRYNLKRKVAGVPGVTEALFLARQSALAQEKEK
QNETPMLYSCGVCGKGYRSSKAYSQHLKSRAHIMQASQGTNHPQEVKAIIKPLPRRTVNK
PPQPRDRNDDESQDEWEEVDPEEELVGQAANSLTHLNVTEDGAGDEMEEEEEEEEELDPC
CCFMCDLEHDTIESCMVHMHKLHGFFIPDVEYLKDPEGLLTYLGLKVKRDFMCLYCNERC
HPFASLEAVRKHMAAKGHCKVHYGDGDEEEEAELEEFYDYSSSYVDESGKQLVAAGDTGN
SVELVGGSELVITKRSDEGILSKTLGSREYMRYYRQKPRPSPANNMAITAALASRYRSMG
IATVQSREQMVRMKVMKAMNRGGVEAMRTKVGVKNNVIRNLPKNVPY
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgccgggtctaacctgcaacgcatgtaacaaagaattcctggacgatgcagaccagaag
cttcattacaagtctgattggcatcgctacaatctcaagcgcaaggtagctggagttccg
ggagtgacggaagctctgtttctggcaagacaatcggcacttgctcaagagaaagagaag
cagaatgagacccccatgctttacagttgtggtgtttgtggcaagggctatcgaagttcc
aaggcttattctcagcatctcaagtcacgagcccatatcatgcaggcttctcaagggacc
aatcaccctcaagaggtgaaggcaattatcaagccacttcctcgtcgaaccgtgaacaaa
cctccccaacccagggatagaaatgatgatgaaagccaagatgagtgggaggaagttgat
ccagaagaagagttggttggtcaggctgcaaattctttaacccatttgaatgttaccgag
gatggagctggtgatgaaatggaagaagaagaggaggaggaggaggagctagatccatgc
tgttgttttatgtgcgaccttgagcatgataccattgaaagttgcatggttcacatgcat
aagttacatggtttcttcatacctgatgttgagtatttgaaggacccagaaggcttgctc
acctatcttggccttaaggttaagagggatttcatgtgtctgtattgtaacgaaaggtgt
catcctttcgctagcttggaagctgttaggaaacatatggcagccaaaggtcattgcaag
gtgcattatggtgatggtgatgaagaagaggaagcagagttggaagaattctatgattat
agcagcagctacgtggatgagagtgggaagcagttggttgcagctggtgatacaggcaac
tcagtagaacttgtcggtggttcagagcttgttataaccaaaagaagtgatgagggaata
ttgagtaaaacacttggttcccgagaatacatgcgctactatcggcagaagcctcgtcca
tcacctgcaaataacatggccattacagctgccttggcctcaaggtacaggagtatgggc
atagcaaccgtgcagtcaagagagcaaatggtgagaatgaaagtgatgaaagcaatgaat
agagggggtgtggaggcaatgcgtacaaaagttggcgtgaagaataatgtcattcggaac
ttgcccaagaatgttccgtattag
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