Gossypium raimondii: 105768121
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Entry
105768121 CDS
T04129
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
gra
Gossypium raimondii
Pathway
gra03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105768121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105768121
03016 Transfer RNA biogenesis [BR:
gra03016
]
105768121
03012 Translation factors [BR:
gra03012
]
105768121
04131 Membrane trafficking [BR:
gra04131
]
105768121
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gra04147
]
105768121
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
105768121
Transfer RNA biogenesis [BR:
gra03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
105768121
Translation factors [BR:
gra03012
]
Eukaryotic type
Elongation factors
105768121
Membrane trafficking [BR:
gra04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
105768121
Exosome [BR:
gra04147
]
Exosomal proteins
Proteins found in most exosomes
105768121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
AAA_22
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
105768121
NCBI-ProteinID:
XP_052485355
LinkDB
All DBs
Position
4:complement(14217575..14220016)
Genome browser
AA seq
446 aa
AA seq
DB search
MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFKXGISKDGQTREHALLITLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKV
GYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLEALDQINEPKRPSDKPLRLPLQDV
YKIGGIGTVPVGRVETGVLKPGMVVTFGPXGLTTEVKSVEMHHEALSEAXPGDNVGFNVK
NVAVKDLKRGFVASNSKDDPAKEAASFTSQVIIMNHPGQIGNGYAPVLDCHTSHIAVKFS
ELLTKIDRRSGKELEKEPKFLKNGDAGMIKMVPTKPMVVETFSEYPPXGRFAVRDMRQTV
AVGVIKSVEKKDPTGAKVTKSAAKKK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggagaaggttcacatcaacattgtggtcatcggccatgtcgactctgggaag
tctacaaccactggtcatttgatctacaagcttggtggtattgacaagcgtgtgattgag
aggtttgagaaggaggctgctgagatgaacaaaaggtcatttaagtatgcatgggtgctt
gacaagcttaaggccgagcgtgaacgtggtattaccatcgatattgccctctggaagttt
gagactaccaaatactactgtactgtcattgatgcccctggacatcgtgacttcatcaag
aacatgattactggtacctcacaggctgactgcgctgttctcattatcgactcgaccact
ggtggtttcaagnctggtatctcaaaggatggtcagacacgtgagcatgctttgcttatt
acccttggtgtcaagcagatgatttgctgctgcaacaagatggatgcaacaactccaaaa
tactccaaggcaaggtatgatgaaattgtgaaggaagtctcctcatatcttaagaaagtt
ggttacaaccctgacaagatcccatttgtcccaatctctggatttgagggtgataacatg
attgagaggtctaccaaccttgactggtacaagggtcccactctccttgaggctcttgac
cagatcaatgagcccaagaggccttcagacaagccactccggctcccacttcaggatgtc
tacaagattggtggcattggaactgtccctgttggtcgtgttgagactggtgtccttaag
cctggtatggtagtgacctttggccctnctggtctgaccactgaagttaagtctgttgag
atgcaccatgaagccctctctgaggctnctcctggtgacaatgttggattcaatgtcaag
aacgttgctgttaaggatctcaagcgtggtttcgttgcttcaaactctaaggatgatcct
gcaaaggaggctgccagcttcacctctcaggtcatcatcatgaaccaccctgggcagatt
ggaaacggatatgccccagtccttgattgccatacctcccacattgctgtgaaattttcc
gaattgctgaccaagatcgacaggcgatctggaaaggaacttgagaaggagcccaagttc
ttgaagaatggtgatgcagggatgataaagatggttcccaccaagcctatggttgtggag
actttctctgagtacccacccnttggacggtttgctgtcagggacatgcgtcagactgtg
gctgttggtgtcatcaagagcgttgagaagaaggacccaactggtgctaaggtcaccaaa
tctgctgccaagaagaaatga
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