Gossypium raimondii: 105768269
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Entry
105768269 CDS
T04129
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
gra
Gossypium raimondii
Pathway
gra03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105768269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105768269
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
105768269
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
105768269
NCBI-ProteinID:
XP_012443573
UniProt:
A0A0D2UFL0
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Position
5:complement(2558502..2560697)
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AA seq
218 aa
AA seq
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MGDLHMGVEADAINDSSSDNHSKRVDIYPLSCYYFGSKEAIVFKDETLFDRINRMKSNYA
AYGLRTSVEAVILVELFKHPHLLLLQVRNSFFKLPGGRLRPGESDIDGLNRKLSRKLSAS
EDGNETEWQVGECLGMWWRHDFETLMYPYLPSNAKKPKECTKVFLVRLPESQKFIVPKNL
KLLAVPLRQVHENHKTYGPIISGVPQLLSKFTINIVDI
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgggagatcttcacatgggagtagaagcagatgcaatcaacgatagtagcagcgataat
catagtaaaagggtggatatttacccactaagttgttactattttggatccaaagaagcc
attgttttcaaggatgaaactctgttcgatcgtatcaataggatgaaatccaattatgct
gcctatggattgaggacttccgtggaagcagttattctggttgagttgttcaagcaccct
catcttttgctgctgcaagttaggaattccttctttaagcttcctggtggccgtttgagg
cctggtgaatcagatattgatggactgaaccgtaagctttccaggaagctttctgctagt
gaagatggcaatgaaactgaatggcaggtgggtgaatgtcttggcatgtggtggcggcat
gatttcgaaaccttaatgtatccatacttgccatccaatgcgaaaaagcctaaggagtgc
accaaagtcttccttgtgaggttgccggagagtcaaaaatttatcgtacccaaaaatctc
aaattgcttgcagttccactgcgccaggttcatgaaaaccacaagacatatggaccgata
atatcgggagtgccacagttgctatccaagttcaccatcaacattgttgacatttag
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