Gossypium raimondii: 105768314
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Entry
105768314 CDS
T04129
Name
(RefSeq) double-strand break repair protein MRE11
KO
K10865
double-strand break repair protein MRE11
Organism
gra
Gossypium raimondii
Pathway
gra03440
Homologous recombination
gra03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105768314
03450 Non-homologous end-joining
105768314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gra03032
]
105768314
03400 DNA repair and recombination proteins [BR:
gra03400
]
105768314
DNA replication proteins [BR:
gra03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
105768314
DNA repair and recombination proteins [BR:
gra03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
105768314
BRCA1-C complex
105768314
NHEJ (non-homologous end-joining)
MRX complex
105768314
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
PspAA
ASTN1_2_fn3
Motif
Other DBs
NCBI-GeneID:
105768314
NCBI-ProteinID:
XP_012443640
UniProt:
A0A0D2U104
LinkDB
All DBs
Position
5:complement(53693031..53700437)
Genome browser
AA seq
720 aa
AA seq
DB search
MADSRSEDSSNTLRILVATDCHLGYMEKDEIRRHDSFQSFDEICSIAEDRQVDFLLLGGD
LFHENKPSRSTLVKAIEILRRHCLNDQPVQFQVVSDQTVNFQNAFGHVNYEDPHFNVGLP
VFSIHGNHDDPAGVDNLSAVDILSACNLVNYFGKMVLGGSGVGQITLYPILIRKGSTAVA
LYGLGNIRDERLNRMFQTPHAVQWMRPEPQEGCEVSDWFNILVLHQNRVKMNAKNAINER
FLPRFLDFIVWGHEHECLIDPQEVPGMGFHITQPGSSVATSLIDGESKPKHVLLLEIKGN
QYRPNKIPLTSVRPFEYTEVVLKDEPDIDPNDQNSILEHLDKVVSGLIEKSNRKAVNGSE
QKLPLVRVKVDYSGFMTINPQRFGQKYVGKVANPQDILIFSKSSKRSQKEAKIDDSERLR
PEELNQQNIEALVAENNLKMEILPVNDLDVALHNFVNKDDKMAFYNCLHYNLEETRKKIG
KDSDVSKFEEEDLILKVGECLEERVKERSSHPTDTSQFTSSMQSFENIRSKNVTGIGSAA
SFSDDEDTAQILSSANRGRKGSSSASRSSRDASELGKSSTRGRGRGRGRGSSGLKQTTLD
ATLGFRRSQRSTSVKVQSIADDEENVDSASSEEHEINEVESNSENENDEITKGRGRKRAA
PRGRGRGTTSKRGKKSDNSSVHSGFMNKLDDDDDDDAEEIARRFNKPQPRVTKSYGALRR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggccgactcaagaagtgaggatagtagcaacacacttcgaatactagtagcgacggat
tgtcatttaggttatatggagaaagatgaaatacgacgacatgattcatttcaatcattt
gatgaaatatgttcaattgcagaggatagacaggtggactttttacttcttggaggagat
cttttccatgaaaataagccttcgaggtcaactttggttaaggccattgagattcttcgt
cggcattgccttaatgatcaacctgtgcagtttcaagttgttagtgatcagactgtgaat
tttcagaatgcatttgggcatgtgaattatgaagatcctcacttcaatgttggcttgccc
gtgtttagcattcatggaaaccatgatgaccctgctggagtggacaacctttctgcagtt
gatattctttctgcatgtaaccttgtcaactacttcgggaaaatggttcttggtggttca
ggcgttggtcagattacactctaccctattcttatcaggaagggctcaactgctgtagct
ctttatggtcttgggaatattagagatgagcggctcaacagaatgtttcagaccccacat
gccgtgcaatggatgcgacctgaacctcaagaaggatgtgaagtgtctgattggttcaac
attctggtgcttcatcagaacagagtgaagatgaatgctaaaaatgcgataaatgagcgc
ttcttaccacgcttccttgatttcatagtgtggggacatgaacatgaatgtcttattgac
cctcaggaagtaccagggatgggatttcacattactcaaccaggttcctccgttgcaacg
tcactgattgatggagaatcaaagccaaaacatgtgctccttttagaaattaagggaaat
caatatcgtccaaacaaaatacctttgacatcagtgaggccctttgaatataccgaggtt
gtgctgaaggacgaacctgacattgatcccaatgatcaaaactcaattcttgaacatttg
gacaaagtggtgagcggtctgattgagaaatctaataggaaagctgtcaatggatcagag
cagaagctcccattagtccgagttaaggtggattactctggattcatgacaataaatcct
caaagattcgggcagaagtatgttgggaaggttgcaaatcctcaagatattcttatattc
tccaagtcttctaaaaggagtcagaaagaagccaaaattgatgattctgaaaggcttcgt
ccagaagaactaaatcaacagaatatagaagcattagttgctgaaaacaatctgaaaatg
gagattcttccagtcaatgacttggatgttgcgctgcacaattttgttaataaggatgac
aaaatggctttctataactgtctgcattataatcttgaagaaactcgtaaaaaaattgga
aaggattcagatgtttcaaagtttgaagaggaagacttaattcttaaagttggagagtgc
ttggaggaacgtgtcaaggaaaggtcttcgcaccctacagatacctctcagttcacatcc
agtatgcagtcgtttgagaacatccggagcaaaaatgttacaggaataggaagtgcagcc
tcctttagtgatgatgaagacacagcgcaaatattaagctccgcaaatagaggccggaaa
gggtcttcgtcagcttctcgatcatcacgtgatgcttctgaacttggtaaaagttccact
agaggaaggggtagaggtaggggcagaggctctagtggcttaaagcagacaactcttgat
gctactttggggtttcgccgttctcaaagatctacctcggttaaggttcaaagtattgct
gatgatgaggagaacgttgactctgcttcaagtgaagaacatgaaattaatgaggttgaa
agcaattcggaaaacgaaaatgatgaaattactaaaggtagaggacgcaaaagagctgca
ccaaggggaagaggtagaggcactacatctaagcggggaaagaaatctgataactcttca
gttcatagtgggttcatgaacaagcttgacgatgatgacgacgatgatgctgaagagatt
gctcggagatttaataaacctcaacctcgggtaacaaaaagttatggtgctttgagaagg
taa
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