Gossypium raimondii: 105768415
Help
Entry
105768415 CDS
T04129
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 32
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gra03009
]
105768415
Enzymes [BR:
gra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105768415
Ribosome biogenesis [BR:
gra03009
]
Eukaryotic type
90S particles
Helicases
105768415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
TP53IP5
Motif
Other DBs
NCBI-GeneID:
105768415
NCBI-ProteinID:
XP_052486528
LinkDB
All DBs
Position
5:complement(55171428..55176051)
Genome browser
AA seq
751 aa
AA seq
DB search
MRRPKSRAVRKQQKNNELQEIEILNEWIESQKPESGSNPLSRDPLKSKSPIGRIVDPESG
AVSFSRYAGARKFYELPLSKRTKNGLEGGGFKKMTDIQVASLPHALCGRDILGAAKTGSG
KTLAFVIPVLEKLHRERWGPEDGVGSIIISPTRELAGQLFDVLKTVGKHHNFSAGLLIGG
RKEVDSEKERVNELNILVCTPGRLLQHMDETPNFDCSQLQVLVLDEADRILDIGFKKTLN
AIVSQLPKRRQTLLFSATQTKSVQDLARLSLKDPEYISVHEKAVTATPSRLQQTAMIVPL
EQKLDMLWSFIKAHLRSKILVFLSSCKEVKFVFEAFKKLRPGIPLKCLHGRMNQEKRLGI
YSQFCESQSVLFSTDVASRGLDFNKAVDWVVQVDCPEDVASYIHRVGRTARYLSGGRSVL
FLTPSEMKMLEKLQAAKVPIQFIKANTKRLQPVSGLLSALLVKYPDMQQLAQRAFITYLR
SIYIQKDKEVFDVTKLPIDEYSASLGLPMTPKVKFLNQKEKRETESEKSSLIEPKIYDEE
NESVIPKEELLVEDVKENRGGKDFLLKDDAPDVEGNTSEIGDIVSNTDLEEKKLKINVHR
PVGTRVVFDEEGNTQAPLAMLADKTSGDILLDQDKKNDFYKKMREELKQVDKEDKLLERQ
RLREKRIKKKMKLKKGQREEEDGEEEDDLSGSEGEPDANRKRKRSKIYFHSDSDDGEKEE
DKAGSASINAESISLAEQEELALKLLNSMHS
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagaccgaaatcgagagctgtccgaaaacaacagaagaacaatgagctccaagaa
atagagattctgaacgaatggatagaatcccagaaacccgaatccggttccaatcctttg
tcacgagacccgctgaaatccaagtcgccaatcggccgaattgtcgaccctgaaagtggc
gccgtttcattctcgaggtacgcgggagcgaggaaattttatgagctgccgttatcaaag
aggacgaagaatgggttggagggaggtgggtttaagaagatgacggatatacaggtggcg
tctttgcctcacgcgctttgtggaagagatattctcggtgccgctaaaactgggtccgga
aagactcttgcttttgttattccggtcctggagaagctgcatagagagagatggggtcct
gaggatggagtaggcagcatcataatatctcccacaagggaactagctggtcagcttttt
gatgtattaaaaactgttggcaagcatcataattttagtgctggccttctaattggtggt
cgaaaggaagttgacagtgagaaagagcgggtgaatgagctgaatattctagtttgtact
cctggacgtcttcttcagcatatggatgagactccaaattttgattgttctcagcttcag
gttttggtccttgatgaggctgatcgtattctcgacattggttttaagaagaccttaaat
gcaattgtatcacagttaccaaagcgtagacaaacattgcttttttcagcaacgcaaaca
aagtctgttcaggatcttgctaggcttagcttgaaagatccagagtatattagtgtgcat
gagaaagctgtgacggccactcctagtcgcttgcagcaaactgctatgattgttcctctt
gaacaaaagttggatatgttgtggagtttcataaaggcacatcttagatcaaagatcctt
gtgtttctttcaagctgcaaagaggttaaatttgtctttgaagccttcaagaaactgcgt
cctggaatacccttgaaatgtcttcatggaaggatgaaccaagagaagaggctgggtata
tattcccaattctgcgagtctcaatcagttctcttctcaaccgatgtggcctccagaggc
cttgattttaacaaggctgttgactgggttgtgcaggtagattgtcccgaagatgttgca
tcctatatacaccgagttggccgcactgctcgttatctttccggaggaaggtcggtttta
tttttgacgccttcagaaatgaagatgcttgaaaagttacaggcagcaaaagtacctata
cagtttattaaggcaaatacaaagaggttacaaccagtttctggattattgtcagcttta
ctagttaaatatccagacatgcagcagctggcacagagggcctttatcacatatctgcgt
tctatttatattcaaaaagataaagaggtttttgatgtcacgaaattgcctattgacgaa
tattcagcatcacttggtttgccaatgacccccaaagtcaagttcttgaatcaaaaagag
aaaagagaaaccgagtcagaaaaatcttctcttattgaaccaaaaatatatgatgaagaa
aacgagtcagttattccaaaggaagagctacttgttgaagatgtcaaagagaacagaggg
ggcaaagattttcttttgaaggatgatgcaccagatgttgaaggaaatactagcgaaatt
ggagatatcgtcagcaacacggatcttgaagaaaaaaagctgaagatcaatgttcatagg
cctgtggggacaagggttgtctttgatgaggaaggcaacacacaggctccacttgctatg
ttggctgacaagacgagtggcgatatactgcttgaccaagacaaaaagaatgatttctac
aagaaaatgagagaagagctgaagcaggtggacaaggaagacaaacttctagagcggcaa
cggcttagggagaaacggatcaagaagaagatgaagttgaagaaagggcaaagggaggaa
gaggatggtgaagaggaggatgatctttcaggttcagaaggagaaccggatgcgaacaga
aaacggaaaagatcaaaaatatactttcatagtgatagcgatgacggtgaaaaggaagaa
gataaggctggatcggcgagtatcaatgccgaatccatttctctggcagaacaagaagaa
cttgctcttaagttattaaactcaatgcactcttaa
DBGET
integrated database retrieval system
