Gossypium raimondii: 105768564
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Entry
105768564 CDS
T04129
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gra
Gossypium raimondii
Pathway
gra00040
Pentose and glucuronate interconversions
gra01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105768564
Enzymes [BR:
gra01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105768564
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
DUF1803
Motif
Other DBs
NCBI-GeneID:
105768564
NCBI-ProteinID:
XP_012444002
UniProt:
A0A0D2SIU7
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Position
5:complement(56581196..56583227)
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AA seq
392 aa
AA seq
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MARFYLVSLLICLHATSTFSRHVPQQISEPVPRYSTRRQLDTEQCRTGNPIDDCWRCDPE
WEANRKKLADCAVGFGKNAIGGRDGDVYVVTDSGNDDPLNPTPGTLRHAVIQTEPLWIIF
DHDMVINLREQLLINSYKTIDGRGHDVQITSGPCITLHNVSNVIIHNIYIHKCSPSGNAM
VWDPFPHSGSDGDGISIFGSRDVWIDHCTLANCYDGLIDATYGSTSITISNNYMLHHNEV
MLMGHSDEFLDDKNMQVTIAFNYFGEGLVQRMPRCRHGYFHIVNNVYTGWQMYAIGGSAN
PTINSQGNVFVASDNNYSKEVTKRESYFDEWKNWNWRSEGDMMLNGAFFTPSGQEASESY
IKASSMVARPSSLLTQTAQYAGTLRCRKGYGC
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggttctatctagtttccctactcatatgcttacatgctacctcaacattctct
agacatgttcctcagcaaatatcggaaccagtacctaggtactcaacaagaagacagttg
gatacggaacaatgtagaactggtaatcctatagatgattgctggaggtgtgaccctgaa
tgggaagccaaccggaaaaagctagctgattgtgcggttgggtttgggaaaaatgccatt
gggggtcgagatggtgatgtttatgtagtcacggattcaggtaatgatgatcccctaaat
ccaactccaggtacattacgtcatgcagttattcaaactgaacctctgtggatcatcttt
gatcatgacatggtcataaacctaagagaacaactgctgatcaactcgtacaagaccatc
gatggaagaggacacgacgtccaaatcacaagtggaccgtgcataacgttacacaatgtg
agtaatgtaatcatacataacatctacatacataagtgctcaccttcagggaatgcaatg
gtgtgggacccgtttcctcacagtggatctgatggagatgggatctcgatatttggctcc
cgggatgtgtggatcgatcactgcacactagcaaattgttacgacgggctcattgatgcc
acgtatggttcaacatctataacaatctctaacaactatatgctacatcacaatgaagtc
atgcttatgggtcatagtgatgagttccttgatgacaagaacatgcaagtaacaatagct
ttcaactactttggggaaggcctggttcagagaatgccgaggtgcaggcatggatatttt
cacattgtcaacaatgtatacaccggttggcagatgtatgcaatcggaggaagtgccaac
ccgacaatcaatagccaagggaacgtattcgtagcatcagataacaattattcaaaggag
gtgacaaaacgtgaaagctactttgatgagtggaagaactggaattggagatcagaagga
gatatgatgcttaatggtgcttttttcacaccttctggacaagaagcttcagaaagctac
ataaaagcatcaagcatggtggcaagaccatcttcacttctaacacagacagctcagtat
gctggtactctacgttgccgaaaaggctacggctgctaa
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