KEGG   Gossypium raimondii: 105768580
Entry
105768580         CDS       T04129                                 
Name
(RefSeq) DNA repair protein UVH3 isoform X2
  KO
K10846  DNA excision repair protein ERCC-5
Organism
gra  Gossypium raimondii
Pathway
gra03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    105768580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gra03400]
    105768580
DNA repair and recombination proteins [BR:gra03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     105768580
SSDB
Motif
Pfam: XPG_I XPG_I_2 UBM
Other DBs
NCBI-GeneID: 105768580
NCBI-ProteinID: XP_012444060
LinkDB
Position
7:1943647..1952842
AA seq 1440 aa
MKSSLATQEDSNLANASTSVAAIPSEDDGDEDEEMILPAMHGNVDPAVLAALPPSLQLDL
LGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRAAAGRGVAGVQ
TSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQQERHSDHPSGFLGSVKSSCKSNV
AAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMKEIEKERTNL
NKGVNVKSVPDKSKIDASKSVSNGNQFVETSHDDNGESVNVNESNQQSAFETESCMEITF
EDDGKTEYFDDDDIFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEWEEGVVEGKWDGVT
PGMNAEHNLLNKESNITDDSEVEWEEEPSDAPKSSSGPVESGRMLSKGYWEEESDLQEAI
RRSLTDVGVEKSNSFPSDVIESKNLGENLDEDFGSLHEKGDTGASSFPGDAVNWQNKSCE
NLDRPRKPCTVNEPSISETFNSPESPSPVHNSDKNMTILSKFSERSDGSHSEQSRHNETA
EFVATLEKEVDFPTGKHLDVSKEVDGLSTISDSWFKDNSHSFDAAHGDIPDTIQVDKKTG
SEDEPSNLVSDNKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLH
IEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQ
RKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVF
LFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNA
IEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRG
SESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAY
SLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKRETQLRMEAF
YTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQSGDDKSGEP
SNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRRETNKQSAGN
GRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRRSMHTRNPVNY
TVKDLEDEGGLSHKESSGEDAMEKEAGEDVKEKIQCEAREPSLDNIYGDYLETGGGFCMD
ERGTDLPDANQDVDLETEPTNDYLKMGGGFYMEGDIDQPDTSQDVNPFSETGSANDYLKM
GGGFCMEESETIGNPDAGNYEDPVQATESSNCFAFMDKADDNIDSAEPSVNAEGSLLDKL
QNGGKTPDEANDALNLNHRNAANKDDSKESASLPEASDVGTTFISGLSAMPSLKRKRRRR
NT seq 4323 nt   +upstreamnt  +downstreamnt
atgaaatcatctcttgcaacccaggaagatagcaatttagctaatgcatcaacatcagtt
gcagccatcccttctgaggacgatggtgatgaagatgaagagatgatacttccagcaatg
catgggaatgttgatccagctgttttagctgctttgcctccatctctgcaacttgatctt
cttggtcagatgcgggaaagattgatggctgaaaatagacaaaagtatcaaaaagttaaa
aaggcacctgaaaagttctccgagctacaaatacagtcttatcttaaaactgttgctttc
cgtcgagagatagatgaagttcagagagctgctgctgggcgaggggttgctggtgtacag
acttccaggatagcttctgaagccaacagagaatttattttttcatcatcatttactgga
gacaaacaggcacttacgtctgctagaaaagagattgatgaagataagcaacaagagaga
cattcagatcatccttcaggttttctgggtagtgttaaatcaagctgtaagtccaatgtg
gcggcagaatcagtccctgatgaatctactagtgctcctgatgaagatgttgggacatat
gttgatgcgacaggccgtatacgtgtcagtagagtgagaggtatgggaattcgtatgact
cgtgatttacaaaggaacttagatttgatgaaagagattgagaaggaaagaacaaatttg
aataagggtgtgaatgtgaagtctgttccagataagagcaaaattgatgcttcaaagagt
gtatctaatggaaatcagtttgtagaaacttcacatgatgataatggtgaatctgtaaat
gtgaatgagagcaatcagcagtctgcttttgaaactgaatcttgtatggaaataactttt
gaggatgatggaaagacggagtattttgatgatgatgatatttttgcacgcttagcagca
ggtgaacctgtaacactaccttctcctgaggaaaaatctttgagaaagcagccttcgggt
tctgattcagattttgagtgggaggaaggagtggttgaaggaaaatgggatggtgttact
cctggtatgaatgctgaacataatcttttgaataaggaaagcaatattactgatgatagt
gaagtggaatgggaggaagagccttctgatgctcccaagagttcctctggacctgttgaa
tcaggtagaatgctctctaaaggttactgggaagaggagtctgatctacaggaggcaata
aggagaagtctaacagatgtaggtgttgaaaaatctaattcttttccttctgatgttatt
gaatcaaaaaacttaggagaaaacttggatgaagattttggatctctgcacgagaaaggt
gatacaggtgcaagtagttttccaggggatgctgttaattggcagaataagtcttgtgaa
aatttagatagaccccggaagccatgtactgtgaatgaaccaagtatatcagaaaccttt
aattctcctgagagcccatcacctgtacataattctgataaaaacatgacaatattgagt
aaattttctgaaagatctgatggttctcattctgagcaatcaaggcacaatgaaactgca
gaatttgttgcaacactggagaaggaggtcgattttcctactgggaaacacttggatgtt
tctaaggaggttgacgggttgtctaccatctctgacagttggtttaaggataattctcat
agttttgatgcagcacatggtgacattcctgataccattcaggttgataagaaaactggt
tctgaagatgaaccatctaacctggtcagtgacaataaaagtagtattgaagctgaaatt
ctggatcaagataagaaaattgattttgaagctaaaccatcgcagcaatcagttgacaca
gttaacttatccattcccacggtgcagtcatctgcaaataaagtaatatctgatcttcac
attgagcaagaactgtcaggggatataacttatgaaaattgtgtcaacaaagcagagcag
catacagacatgtctaccattaagggcaatgataatgaagaaattaagttctcaaaggct
agcttggatgaggagctgctaattctagatcaggaatgtatcaatatggtagatgagcag
aggaagcttgaacgtaatgcagaatctgtcagtagtgaaatgttcgcagagtgtcaggaa
ctgctgcaaatgtttggcttaccctacattattgcaccgatggaggcagaagctcaatgt
gcttatatggagctaacaaaccttgttgatggtgttgtcactgatgattctgatgtattc
ttgtttggggcacgaagtgtttacaagaatatatttgatgataggaaatatgtggagact
tactttatgcaggacattgagaaggaacttggtttgacaagggaaaagttaatgcgaatg
gcattgcttcttgggagtgactacactgaaggggttagtggaattggtattgttaatgct
attgaggtagtgaatgcattcccagaagaagatggacttcataaattccgggagtggatt
gagtcccctgatcctactatcttggggaagctcaatgtgcaagaaggatctagtgcaagg
aaaagagggccaaaatccacagaaaaagatgtaaatggtacaaaaaccagcacgagagga
tctgaaagcaacaatggaacgtcttcacttgaccagaacagttttcaagctgacaagaac
atgcagtctacagattgtaccgatgatataaagcagattttcatggataagcatagaaat
gtgagcaaaaactggcacataccctcatcattcccaagtgaagcagttatttctgcatat
tctttgccacaagtagataagtcaactgaaccattcacatggggaaggccagatcttttt
gttcttcgcaaactgtgctgggagaagtttggatggggtagtcagaaatcagatgagttg
ctgctgcctgttttaagagagtccgaaaaacgagagactcaattgcgaatggaagccttt
tacactttcaatgaaagatttgctaaaatacgtagcaagagaattaagaaagctgttaaa
ggaatcactggaaaccaatcctcggagttgatagatgatggcatgcaacaagtttctaaa
agtaggagaaagagaagagctagtccagttcaaagtggagatgataaatcaggggaacct
tcaaacaagaaagaggacattgcttctcgatgtcagagtaaatccacggacaaatcagtg
cctaagacatcaaggaaacggcagagctctggaaaggatgtttcatttgagatgagaact
ccagaaccacaactgcagacgttgcgcaggcgagaaaccaacaaacaatcagctgggaat
ggaagaggtagaggtggtggggaaggaagaaggcgtaaaggaagttctggttttcagcag
tttgaaaccagctcttctggtggtgatagcggcaatgttaaccaggaagttgatggggag
aagttagatcagccacgggaagtgcgaaggtccatgcacactcgaaaccctgtgaattac
actgtgaaggacctagaagacgagggtggcttgagccataaagaatcctctggtgaagat
gcaatggagaaagaagctggtgaagatgtaaaggaaaagattcagtgtgaagctagagag
ccttctcttgacaacatctatggagactatctcgaaacaggaggcggattttgtatggac
gagagaggaactgatctacctgatgctaaccaagacgttgatcttgaaactgaaccaact
aatgattacctgaaaatgggaggtggattttacatggaaggagacattgatcaacctgat
acaagccaagatgtcaatcccttttctgaaaccggatcagccaatgattacctgaaaatg
ggaggtggattttgcatggaagaaagtgagacaatcggtaacccagatgccggtaactat
gaagatcctgtacaagctactgagtcttcaaactgctttgcttttatggacaaagctgac
gataacattgattcagctgaaccatctgtcaatgctgaaggatcactactggataaactt
caaaatggagggaagacacctgatgaagcaaatgatgctctgaatctaaaccatcggaat
gctgcaaataaagatgattccaaggaaagtgcatcacttccggaggcaagtgatgtcgga
acaacattcatcagtggtctaagcgcaatgcctagcttgaagaggaagcgcaggaggagg
taa

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