Gossypium raimondii: 105768784
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Entry
105768784 CDS
T04129
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b isoform X1
KO
K11088
small nuclear ribonucleoprotein D3
Organism
gra
Gossypium raimondii
Pathway
gra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105768784
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105768784
03041 Spliceosome [BR:
gra03041
]
105768784
03032 DNA replication proteins [BR:
gra03032
]
105768784
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
105768784
Spliceosome [BR:
gra03041
]
Complex A
U1 snRNP components
Sm proteins
105768784
U2 snRNP components
105768784
Complex B
U1 snRNP components
105768784
U4/U6.U5 tri-snRNP components
105768784
Complex C
U2 snRNP components
105768784
DNA replication proteins [BR:
gra03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
105768784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
105768784
NCBI-ProteinID:
XP_012444403
UniProt:
A0A0D2TS69
LinkDB
All DBs
Position
5:complement(14518538..14520337)
Genome browser
AA seq
107 aa
AA seq
DB search
MSRGLGIPVKLLHEGSGHVVTVELKSGELYRGSMIECEDNWNCQLDNITFTAKDGKVSQH
EHVFIRGNKVRFMVIPDMLKNAPMFKRLDAKIKELLSWELAEVEQLP
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atgagccggggcttgggcattccggtgaagctgctacacgagggttcaggtcacgtggta
acggtggaactcaaaagcggagagctttacagaggaagcatgatcgagtgcgaggataac
tggaattgccagctcgacaacatcaccttcactgctaaagatggaaaggtatcacagcat
gagcatgttttcattcgaggtaataaagtcagatttatggtcataccagacatgttgaag
aatgctcctatgttcaaacgtctggatgctaaaatcaaggagctcctctcttgggagttg
gcagaggtagagcagttgccatga
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