Gossypium raimondii: 105768900
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Entry
105768900 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105768900 isoform X1
KO
K23288
syndetin
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105768900
Membrane trafficking [BR:
gra04131
]
Protein recycling
Others
EARP complex
105768900
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
105768900
NCBI-ProteinID:
XP_012444612
UniProt:
A0A0D2TGA1
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Position
5:6538669..6553340
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AA seq
1099 aa
AA seq
DB search
MQQPNLFPFGSVLGNPFLLNGGVGDLSDGGFDSSRVFFLVPFLLFQGGGMDLSKVGEKIL
SSVRSARSLGLLPSSLSSDRPEVPARAAAAAAVARALSGLPPDQRYSLPSSSEELMSIYG
SKPQSQIVEDVEEKFYEEEFDPIKHVLEHIPSDENELEYFEKQATLRLAQLDRVAEQLSR
NVMEHHEVMVKGMNLVRELEKDLKIANVICRNGRRHLTSSMNEVSRDLVVNTDSKKKQAL
MHLLPVLAELLHARDMQVSLESLVEEGNFCKAFQVLSEYLQLLDSFSELSAIQEMSRGVE
VWLGRTLQKLDSLLLGVCQEFKEEGYLTVVDAYALIGDVSGLAEKIQSFFMQEVISETHS
VLKSIILYEDQDVHMQNSRLTYSDLCLQIPESKFRQCLLRTLAVLFKIMCSYHEIMGFQL
ENKVLECPVTNAKLMKDGIPGSSSIKESTTATSSADTSGRMDSGNVESDKPVSDGRNGDG
ATSSSGSPWYQLRKEAITFVSQTLQRGRKNLWQLMTSRVSVLLSASAAASTSIHQFLKNY
EDLSTFILAGEAFCGVEAFEFRQKLKGVCGNYFAAFHRQNVFALKMVLERETWLRLPPET
AQIISFAGLVGDGAPLIAASDGRSSNSRVLRADKSANKVDTGAKKSGFSPWLRNGNPFLL
KVSSSHKEAHNSSPLNGTTSVEYEGNADNIHGDVSPRGDENHINGANSISEEENEDLLAD
FIDEDSQLPSRISKPNLSRNYSLHFSNDDFTAQTGSSLCLLRSMDKYARLMQKLEIVNVE
FFKGICQLFEMFFYFVFETFGLQNMNSSGKTSTDSLNYRLKTALSQVTQDCEEWIKTSSG
SLSSSTAHADLTPTAPQNTNFGSPPGTSFGLKERCAGADTVALVARILHRSRTNLQSLLL
KSNTAIVEDFFVHLVGAVPDLVEHIHRTTARILLHINGYVDRIANAKWELKELGMEHNGY
VDLLLGEFKHYKTRLAHGGIQKEVQDLLLDYGLEIVAETLIEGLSRVKRCTDEGRALMSL
DLQVLINGLQHFVSINVKPKLQIVETFIKAYYLPETEYVHWARAHPEYSKNQIVGLINLV
ASMKGWKRKTRLEVLEKIE
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagccgaatctgttcccgttcggcagcgttttggggaatccgtttttgttgaat
ggcggcgttggcgatttaagcgacggtggatttgacagctctagggttttctttttggtc
ccttttttgttattccaaggaggtggaatggatttgtccaaggttggggagaaaatcctc
agctccgtgcggtccgcgcgatcacttggtctcttgccttcttctctctcttctgatcgg
cccgaggttccagctcgagctgcagcagcagcggctgttgctcgtgctctttcaggattg
ccacctgatcagagatatagtcttccatcgagttctgaagaactgatgtcaatatatgga
agcaaacctcagagtcaaatagtggaagacgtagaggaaaaattctatgaggaggagttt
gatccgataaaacatgtcttggagcatattccttctgatgaaaatgaactagaatatttt
gagaaacaggccacacttagattagctcaactggatagagtagcagaacaattatcccgc
aatgttatggagcatcatgaagtaatggtgaagggtatgaatttggtcagggaattggag
aaagacttgaagattgcaaatgtcatctgcaggaatggcagaaggcatctaacatcatca
atgaatgaggtttctagggaccttgttgtgaatactgattctaagaagaaacaagctctt
atgcacttgcttccagtactagccgagcttcttcatgcacgggacatgcaagtatccctt
gagtctctggtcgaggaaggtaatttctgcaaggcatttcaagtactatccgagtattta
caactactagatagcttctcagagctttcagcaatacaagagatgagccgtggggttgag
gtttggctaggaagaactcttcaaaagctggactcgctcttgttaggagtttgtcaggag
tttaaagaagaaggctatttaactgtggttgatgcttatgctttaataggagatgtctct
ggtcttgccgagaagatacaaagttttttcatgcaagaagttatctcagaaacccactct
gtcttgaagagtattattctctatgaggaccaagatgtacatatgcaaaatagcagactt
acctacagtgatctatgccttcagatacctgaatctaagtttagacagtgtttgttaagg
acactagctgtcctgttcaaaataatgtgttcatatcatgaaatcatgggctttcagctg
gagaataaggttttagagtgcccagtaacaaatgccaaattgatgaaagatgggatacca
ggttcatcttccataaaggagtctacaacagccacttcctcagctgatacatctggaagg
atggattctggaaatgtagaatctgataaaccagtttctgatggtagaaatggcgatggt
gctacatcaagcagtggatctccatggtatcaattaaggaaagaagccataacttttgtg
tcacaaactcttcagaggggacgtaagaatctttggcaacttatgactagccgagtatca
gtactgctgtctgcttctgctgctgcttctacaagcattcatcaatttttgaaaaactat
gaagatcttagcacattcatcttggctggggaagccttctgtggagttgaggcttttgag
ttcaggcagaaattgaagggtgtctgcggaaattattttgctgcatttcatcggcaaaat
gtatttgcacttaaaatggttttggagagagaaacctggcttagattgccaccagagacg
gcacaaataattagttttgctgggctagtaggtgatggagcacccttaattgctgcctct
gatggtaggtcttctaattctagggtgcttcgcgctgacaaatcagcaaacaaagttgac
acaggtgccaagaagagtggattttctccttggcttagaaatggaaacccatttttgcta
aaagtaagctccagtcacaaagaggctcataattcctccccacttaatggaacaacctct
gttgaatatgagggaaatgctgataatattcatggtgatgtctctcctcgtggtgatgaa
aatcatatcaatggtgccaattccatctcggaagaggaaaacgaggatttacttgctgac
tttattgatgaggatagtcaactccctagtcgaatttcaaaacccaacctttcaagaaat
tactctcttcatttcagtaatgatgattttacagcacaaacaggatcatctctttgtctt
ctgaggtcgatggataagtatgcaagattgatgcagaaacttgaaatagtaaatgttgag
ttttttaagggcatatgccagttatttgagatgtttttctattttgtatttgaaacattt
ggtctgcaaaacatgaattcgagtggaaagacctcgacggactctcttaattatcggtta
aagactgccttatcacaagtaacgcaagattgtgaagagtggataaaaacttcatcagga
tccttatcatcttcaaccgcacatgcagatttgacacccactgctcctcaaaatacaaat
tttggttctccaccaggcacctcctttggtctaaaggaaagatgtgcaggtgctgatact
gtagctcttgtagctcggatattgcatagatctagaactaatctccaatcattgctatta
aagagtaatacagctatagttgaagatttctttgtgcacctggtgggtgctgtgccagat
cttgtagagcacatacataggacaactgcaagaatactgcttcacattaatgggtatgtt
gatcgaattgctaatgcaaaatgggaattgaaagagcttgggatggagcacaatgggtat
gtggatttgttgttgggagaatttaagcactacaaaacaaggcttgctcatggaggaatt
cagaaagaggttcaagacctcctattggactacggactcgaaattgttgcagaaactctt
attgaaggtctatcacgagtgaagcgatgcactgatgaaggacgagctctcatgtcatta
gaccttcaggttttaatcaatggcctacaacactttgtctccataaacgtgaagccaaag
ttacagattgttgaaactttcatcaaggcttattatctacctgaaactgaatatgtacac
tgggcacgagctcatccggaatatagcaagaatcagattgtggggttgataaaccttgtt
gcttcaatgaaaggttggaaaagaaaaaccaggttggaagttctggaaaagatcgaatga
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integrated database retrieval system
