Gossypium raimondii: 105768935
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Entry
105768935 CDS
T04129
Name
(RefSeq) zinc finger protein GAI-ASSOCIATED FACTOR 1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105768935
Transcription factors [BR:
gra03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105768935
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
105768935
NCBI-ProteinID:
XP_012444679
UniProt:
A0A0D2RTZ0
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Position
5:3239607..3242423
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AA seq
523 aa
AA seq
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MMKGLVVDESISNLTSTSGEVSASTNQEPLSKKKRTLPGNPDPEAEVIALSPKTLLATNR
FICEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVVRKKVYVCPETTCVHHHPSRALG
DLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKICGTREYRCDCGNLFSRRDSFI
THRAFCDALAEETARAITAANQPGSSVSHINMTNLESQPLLHGYALNATSLNRDQDHRFN
ARVEAAGPDSGPPSINLSSSPFLLGHPLPHDENPSQNPSSTTLLPFQAPPASPHTSATAL
LQKAAQMGVTLSKPLQSPVVSMQRPYYYHHQAHMCGSTTFATSRAWGLSAREELGSEFTH
SLSSFGNKARVTPGFLEQVANATKSNAGAGAGAAAPSSLLHDMMTSLSGTSELEGSSSFE
HSFNGTWITKRNSNKFQENYIDHHNFSETKESQSCRSDNHEGKGSGSSSSNNIRGNDGLT
RDFLGLKAFPHTDIPNLVGLNHHVNSSSAYGQPNQHSETPWQG
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaggtttggtggtggatgagagcatttcgaatttgacttcaacatctggtgaa
gtaagtgcttcgacaaatcaagaaccattatcaaagaagaagagaactctaccaggcaac
ccagacccagaggctgaagtcatagctttgtctcccaagacactgcttgcaacaaataga
tttatatgtgagatctgtaacaaagggtttcaaagagatcagaatcttcagcttcataga
agaggacataacttgccatggaaactaaagcaaagaacaaacaaggaagtggtgaggaag
aaggtatatgtatgtccagagacaacatgcgtgcaccatcacccatctagggctcttggt
gacctcacgggaatcaagaagcacttttgcagaaaacatggggagaagaaatggaagtgt
gaaaagtgttcaaagcgttatgctgttcaatctgactggaaagctcattccaaaatttgt
ggcaccagagagtatagatgtgactgtgggaaccttttctccaggagggacagtttcatc
actcacagagcgttttgcgatgctttagctgaggagactgctagagcaattacagctgca
aaccaacctggttcttctgtttcacacataaatatgaccaatctagaatcccaaccccta
ctccatggctatgccctcaatgcaacatctttgaatagagaccaagatcatcgtttcaat
gcaagagtagaagctgctgggcctgattctggtcccccctcaataaatctttcatcatca
ccatttcttttaggccacccactgccacatgacgaaaaccctagccaaaatcctagttct
actacacttcttccattccaagctccgccagcttctccacacacgtctgcaaccgcactc
ctacaaaaagcagctcaaatgggggtgactttgagcaagcccttacaatcaccagtagta
tccatgcaaagaccttactactaccaccaccaggctcacatgtgtggttccacaactttt
gccacgtctagagcttggggtttgtcggcacgtgaagagttgggaagtgagttcacccac
agtttgtcatcttttgggaataaagctcgtgtcacccctggtttcttggaacaggtggct
aatgcaacaaagagtaatgcaggtgctggagccggtgctgcagctcctagttctctactc
catgatatgatgacttctttatctggtacaagtgagctagaagggtcttcatcttttgaa
cattctttcaatgggacatggatcaccaaaagaaacagcaataaatttcaagaaaattat
atcgatcatcataatttctcagaaacaaaagaatcccaatcatgcagaagtgataatcat
gaaggtaaaggaagtggtagtagtagtagtaataacataagagggaacgatgggttgaca
agagatttcttgggtcttaaagctttcccacatacagatatccccaacttagtagggctt
aatcatcacgtaaactcttcttcagcgtatgggcaaccgaaccagcacagtgaaacacca
tggcaaggttag
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