Gossypium raimondii: 105768947
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Entry
105768947 CDS
T04129
Name
(RefSeq) zinc finger CCCH domain-containing protein 41
KO
K13192
RNA-binding protein 26
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gra01009
]
105768947
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105768947
03041 Spliceosome [BR:
gra03041
]
105768947
Protein phosphatases and associated proteins [BR:
gra01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
105768947
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
105768947
Spliceosome [BR:
gra03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105768947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_Nup35
zf_CCCH_4
PHM7_cyt
AAA_23
RNA_bind
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
105768947
NCBI-ProteinID:
XP_012444706
UniProt:
A0A0D2QWE2
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All DBs
Position
7:complement(1455206..1462275)
Genome browser
AA seq
862 aa
AA seq
DB search
MELKASSPKLGGLSPPAYVSGPEDKEISDEEDDDRNHKHRRHDTRSQSLETDFVDPVFTR
PYKKHNKPFENGHPIRGNESRAGETWKNYNGLPLDKDLTSKFGRRRPGFRLNQTFSGDYG
PGRARGRDNSSWKQCDPRFSSVDIASQMVQPGSVAPSLFAGRGLPNVSNAQSSSWTAFGL
MPGIPNGGLDTLHPIGLQGALRPPMNSSLNMGIPRQRCRDFEERGFCLRGDMCPMEHGVN
RIVVEDVQSLSQFNLPVTVSSAQLLSTPAVPGPLPSGVPPSASLMNSDGIYRKSSKPGMT
GDALGSNGTYTVSTSASEADLYDPDQPLWNNNGSEATAALSGLHSPKVHKMEPLHDNEFP
VRSAGSQGTNLSVWGRIASSRNRIDTKQETGLTPSDYLENETKGEQKEFPSLQGTSCQVK
PISTEGDGTKVMDLSLKSQTDSRHNSRKPTQKAFRTLFVNGIPQKSNKREALLSHFRKFG
QIIDIYIPSNSERAFVQFSRREEAEAALKSPDAVMGNRFIKLWWANRDSIPDDAVKSGSG
IAVNPHGLTAPAFQVQPVATRGKDNLQPTAQKSNVIHDADLSPSLNSPRPVNLNGPKASP
PLQKKLETLEQMKEELRKKQEMLEQKRNDFRRQLDKLQKQSSGAKGDLHTEQAAKRQKVG
IAADPAKASTSSSSEPAAFVATPCTVVTDKNKSTENLALQESTSSKHHSHPSAVVGHPIM
INKYKLDNRPTAFQVIPPLPAGFADVDVLKQHFSQYGDLVSVELQDVEKDDNTGSEASHN
CSVLITYSTHHSAEKAYADGKCWKTHNLQLSWQTSSKDQHSRKETDVETNEKLTACCSTS
GNCEHMECLVPEDSKHNPIPNV
NT seq
2589 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaagcttcatcacctaagcttggtggtctttctcctcctgcttatgttagt
ggtcctgaggataaggaaatcagtgatgaggaggatgatgaccgcaaccacaagcatcgt
cggcatgatacacgttctcaatcattagagacagattttgtggatccagtttttacaagg
ccatacaaaaagcacaataagccttttgaaaatgggcatcctatcagaggaaatgaatct
cgagcaggtgaaacctggaaaaattacaacggtttgccacttgacaaagacttgacatcc
aagtttggcagaagacgccctggatttaggttgaaccaaacatttagcggagattatggt
cctggtagggcaagaggaagggataactcttcttggaaacagtgtgatcctaggtttagt
tcagttgatattgcttctcagatggttcagccaggatctgttgctccaagtctctttgca
ggaaggggattaccaaatgtttcaaatgcacaaagctcatcatggactgcctttgggctt
atgcctggaataccaaatggtggcctagatactctccatcccattggcttacaaggtgca
ctcaggcctccgatgaattcttcattgaatatgggcattcctcgacagcgttgtagagac
tttgaggagcgtggattttgtctaagaggagacatgtgcccaatggagcatggtgtcaat
cgcattgttgttgaagatgttcagagcttgtcacagtttaaccttcctgtaacagtttca
agtgcacagctattgtcaacccctgctgtacctggaccactgccttcaggtgttcctccc
tcagcctctttaatgaacagtgatggtatttatagaaaaagtagcaaacctggaatgact
ggcgatgccttaggttcaaatggcacatatactgtttctactagtgctagtgaggctgat
ttatatgatcctgatcagcctttgtggaataacaatggctcagaagcaacggcagctctc
tcaggtctacattcacccaaggttcataaaatggaacccttgcacgataatgagtttcca
gttagaagcgctgggtcacagggcacaaatttgtctgtttggggtagaattgctagctca
agaaatagaatagatacaaaacaggaaactggtctcacaccgtccgactatcttgagaat
gaaaccaagggagaacaaaaagaatttcccagcttgcaaggcacttcgtgtcaggtaaag
ccaatcagcactgagggtgatggcaccaaagttatggatttgtcactcaagtcacagact
gatagtagacataatagcagaaaaccaactcagaaggcatttcgtacactgtttgtcaat
ggaattccccaaaaaagcaacaaaagagaagctcttctttctcattttcgtaagtttgga
cagattattgacatttatattccatcaaatagcgaacgtgcctttgtccagttttcaagg
agggaagaggcagaagctgctttgaagtcacctgatgctgtcatgggaaaccgctttatt
aagctctggtgggctaatcgggatagcatacctgatgatgctgtaaaaagtggcagtggc
atagcagtaaatccacatggtctaacagctcctgcttttcaagtacaacctgttgctaca
agaggaaaggataatcttcaaccaactgctcaaaaaagcaatgttatccatgatgctgat
ttgtcgccatctctgaattcccctaggcctgtcaatttgaatggtcccaaggcttcacct
ccattgcagaaaaagttagagactctggagcagatgaaggaggagctccgcaagaagcag
gaaatgctggagcagaagcggaatgacttccggcgccagttggacaaacttcagaaacaa
tctagtggtgccaagggcgacctacataccgagcaagctgctaagaggcagaaggtggga
attgcggctgaccccgcaaaagcttcaacttcaagttcctccgaaccagctgcttttgta
gcaacaccgtgcactgtagtgacagataaaaacaaatcaacggagaatcttgcattgcag
gaatctacaagctcaaagcatcattctcatccatcagcggtggtagggcatccaatcatg
ataaataaatacaaattggacaaccgacctactgcttttcaagttattccaccattgcct
gcgggttttgcagatgttgatgttttgaagcaacacttctcacaatacggcgatctcgtc
tctgtggagctgcaagatgtggaaaaagatgataatacgggatcagaggcatcgcataat
tgctcggttcttataacttacagcacacaccactccgcagagaaggcgtatgcagatggg
aaatgctggaagacacataatttacagctttcatggcaaacatctagcaaagaccaacat
agtagaaaggaaaccgatgtggagaccaatgaaaagttaacagcatgctgcagtacttcg
ggtaattgcgagcatatggaatgtttagtaccggaagattcaaagcataatcccatccca
aatgtctaa
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