Gossypium raimondii: 105769061
Help
Entry
105769061 CDS
T04129
Name
(RefSeq) protein argonaute PNH1 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
gra
Gossypium raimondii
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gra03019
]
105769061
03036 Chromosome and associated proteins [BR:
gra03036
]
105769061
Messenger RNA biogenesis [BR:
gra03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
105769061
Chromosome and associated proteins [BR:
gra03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105769061
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
105769061
microRNA pathway
RISC loading complex
105769061
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
105769061
NCBI-ProteinID:
XP_012444900
LinkDB
All DBs
Position
5:complement(1669774..1679318)
Genome browser
AA seq
948 aa
AA seq
DB search
MQPSMPIAEKNMPHMQMRDLKENYVVSKETLKGSMNQKKSSPQMMIKSGDRFEDGKKVLG
RRNGRRRGRGYKVDRLQDGKLEPNMGSTPCKSLMFHTRPGYGQLGTKCIVKANHFLAEIP
GSDLSHYSVEINPEVASRKLDKAIMTELVKLYRNSDLGTKLPVYDGRKNLYTAGSLPFTS
KVFNVILADEDEETGNVRKRDFEVTIKFVAVASMAQLRNLLSGKQVDTPQGALNIIDTVL
RELAAQRYLSVGRFLYSPTIRKPQALGGGVESWRGFYQSIRPTQMGLSLNIDMSTIAFIE
PLPVVDFVAQILGKDVYSRPMSDADRVKVKKALRGVKVEVTHRGNVRRKYRVSGLTTQPT
RELIFPLDEHMNMKSVVEYFQEMYGYTIRYAHLPCLQVGNEKKVNYLPMEACKIVEGQRY
TKGLNEKQITSLLKVSCQRPHEQELDILQTVQQNDYDHDPYAKEFGINISSKLASIEARV
LPAPWLKYSDTGKEKEYLPQVGQWNMMNKKVINGSTVRYWACINFSRSVQESTAHGFCQE
LVQMCQISGMEFDRDPVIPIYSARPDQVKKALKYVYHAAANKLEGKELELLIAILPDNNG
SLYGDLKRICETDLGLISQCCLTKHVFKISRQYLANLSLKINVKMGGRNTVLLDALSWRI
PLVSDIPTIIFGADVTHPESGEDSSPSIAAVVASQDWPEVTKYAGLVCAQPHRQELIQDL
YKTWQDPQRGTVAGGMIRELLLAFKKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRK
ACASLEPTYQPPVTFIVVQKRHHTRLFANNHNDRSSTDKSGNILPGTVVDSKICHPTEFD
FYLCSHAGIQGTSRPAHYHVLWDENNFTADEIQSLTNNLCYTYARCTRSVSVVPPAYYAH
LAAYRARFYIEPEGSETAKSRCTRTTNGSSVRPLPALKDKVKNVMFYC
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgcagccttcaatgcccattgctgaaaaaaatatgcctcacatgcaaatgagagacctg
aaggagaactatgtggtgtcaaaagaaactctaaaggggtctatgaatcagaaaaaatca
tcaccccaaatgatgatcaaaagtggggatagatttgaagatggaaagaaggttttagga
aggagaaatggaaggagaagaggccgagggtataaagtagataggcttcaagatggaaag
cttgagccaaacatgggttctactccatgcaagagccttatgtttcatacaaggcctggt
tatggccagctgggaaccaagtgtatcgttaaagccaaccactttcttgctgagataccg
ggatctgacttgagtcattatagtgtagaaataaacccagaagttgcttctcgtaaactg
gacaaagccataatgacagagctggttaaactatatagaaacagtgacttggggacgaag
cttcctgtttatgatggaaggaaaaacctatacactgctggatcactgccttttacttct
aaggtgttcaatgtaatattggctgatgaagatgaagaaacaggcaatgttaggaaaaga
gattttgaagtgaccataaagtttgtagctgtagctagtatggcacaattgcgcaacctt
ctatctggtaaacaagttgacacccctcaaggtgcccttaatattattgacacggtgtta
agagaactcgcggctcaaaggtacttatcggttggaaggtttctttattctcctactata
aggaaaccgcaagcattaggtggtggtgtagaatcatggcgtggcttctaccagagtata
aggcctactcaaatgggattgtcactgaatattgatatgtcaacgattgctttcattgaa
ccattacctgtcgttgattttgttgctcaaattttgggtaaagatgtttattcaaggcca
atgtccgatgcagatcgtgttaaggttaagaaagctcttagaggtgtcaaagtggaagtg
actcacagaggaaatgtacgcagaaagtaccgggtttcagggctaacaactcagccaaca
agggagctaattttcccacttgatgagcatatgaacatgaaatcggtggttgagtacttc
caagagatgtatggatataccattagatatgcacacctaccttgccttcaagtaggaaat
gagaagaaggtgaattatttgcctatggaggcttgcaagattgttgaaggacagagatat
actaaagggctgaatgaaaagcagattacttctctgctgaaagtttcatgccaaagaccc
catgaacaagaattagacatcttacagacagttcaacagaatgactatgatcatgatcct
tatgcaaaagagttcggcatcaatataagcagcaagcttgcatcaatcgaggctcgagtt
cttcctgcaccatggctgaagtatagtgacactggaaaagaaaaggaatacttgccccaa
gttggtcagtggaatatgatgaacaagaaagtgataaatggaagcactgtaagatactgg
gcttgtataaacttctcacgaagtgttcaagagagcactgcacatggtttttgtcaagag
ttggttcaaatgtgccaaatttctggcatggaattcgatcgagaccctgtaattcctatc
tattcagctagaccagatcaagttaagaaggcactgaaatatgtataccatgctgctgca
aacaagcttgaaggaaaagaacttgaattactcattgccattcttccagacaacaatgga
tccttatatggcgatcttaaacgaatttgtgaaactgatctgggtttgatatctcaatgc
tgcctcacaaagcatgtcttcaagattagcagacagtacttggcaaatctctcgcttaaa
ataaacgtcaagatgggaggaagaaatacagtgctcttggatgctttaagttggagaatt
cctttggttagtgatattccgacaataatatttggagctgatgtaactcatccagagtcc
ggagaggactctagtccgtcgatagctgctgttgtggcctcacaagactggccagaagtg
accaagtatgctggacttgtatgtgctcagcctcatagacaagaacttattcaagattta
tacaagacctggcaggatcctcaacgaggaacagttgctggaggcatgatcagagagctc
ttacttgcatttaaaaaggccactggacaaaagccactgaggataatcttttacagagat
ggtgtgagtgaaggccaattctaccaggttctcctatacgaactcgacgccataagaaag
gcctgtgcatcactggaacccacttaccaacctccagttacattcattgtggttcagaag
aggcatcatactaggttgtttgctaacaatcacaacgacagaagcagcactgacaaaagt
ggaaatatattacctggtactgtggtggattctaagatctgtcatcctactgaatttgat
ttctatctttgtagccatgccggaatccagggaacgagtcgacctgctcattatcatgtt
ctctgggatgaaaacaacttcacagcagatgaaatccaatcactcacaaacaacctctgt
tacacgtatgctcggtgcacgcgatccgtttctgttgtgcctccagcatattatgctcat
ctagcagcctaccgagctcgattctacattgaacctgaaggttccgaaaccgctaaatca
cgttgtacacgcacaaccaatggttcatcggttcggcctttaccagcattaaaagataaa
gtgaagaacgtgatgttttactgttaa
DBGET
integrated database retrieval system
