Gossypium raimondii: 105769243
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Entry
105769243 CDS
T04129
Name
(RefSeq) vacuolar protein sorting-associated protein 35B isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
gra
Gossypium raimondii
Pathway
gra04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105769243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gra04131
]
105769243
Membrane trafficking [BR:
gra04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
105769243
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FliS
Motif
Other DBs
NCBI-GeneID:
105769243
NCBI-ProteinID:
XP_012445186
UniProt:
A0A0D2TMM2
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Position
5:14950428..14957194
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AA seq
785 aa
AA seq
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MLLIGAEDEEKWLAEGIAGIQHNAFYLHRALDSNNLRDALKYSAQMLSELRTSKLSPQKY
YELYMRAFDELRILEMFFKDESKHGVSVVDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKELLQDLVEMCHGVQHPIRGLFLRSYLAQISRDKLLDIGSDYEGDADTVMDAVEFIL
ENFTEMNKLWVRMQLEGPGRVREKREKERSALQELVGKNLHVLSQIEGVDLEIYKETVLP
RVLEQVVNCKDDLSQYYLMDCIIQVFPDEYHLQTLEMLLAACPQVQPTVDIKTVLSRLMD
RLSKYAASSADVLTEFLQVEAFTKLSNAIEKVIEVQVDMPAVGAITLYVSLLTFTLRVHP
DRLDYVDQVLGACVKKLSSIPKLEDSRATKQVVALLSAPLEKYNDTVTALKISNYPRVMD
HLDNGTNKVMAMVIIESIMKNNTCISTADKVEVLFELIKGLIKDLDGATDELDEEDFKDE
QNSVAKLIHMLYNNEPEEMLKIICIVWKHTMAGGPKRLPFTVPSLVFSALRLVRQLQGQE
GDIVGEEVPATPKKIFQLLSQMIEALSAVPSPELALRLYLQCAEAANGCDLEYVAYEFFT
QVFVLYEEEIANSKAQVTAIHLIIGALQRMNVFSVENRDTLTHKTTGYSARLLKKPDQCR
AVYACSHLFWVDGQDGIRDGERVLLCLKRALRIANAAQQMASIARDSSGPVTLFVEILNK
YLYYFEKGNKQITAAAIQHLIELINTEMQGDSATSDAFLASTLRYIQFQKQRGGVMGAKF
ESIKL
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgttgttaatcggagcagaggacgaagagaaatggctggcggaagggatcgctggtatt
cagcacaacgctttttacttgcatcgagctttggattccaataatcttagagatgctctc
aagtactccgctcagatgttatcagagctccggacctccaaactctctcctcaaaaatat
tacgaactttatatgcgagctttcgatgaattgaggatattggagatgttctttaaagat
gaaagcaaacacggtgtctctgtggttgatctgtacgagctagttcaacatgccggcaat
attttgcctagattgtatctcctatgcacggtaggatctgtctatatcaaatctaaggag
gctcctgcgaaggaacttcttcaagatcttgtggaaatgtgtcatggagttcaacatccc
atacgtggactttttttaaggagttaccttgctcaaatcagtcgagacaagttactagat
attggttctgattacgagggagatgctgacactgtgatggatgctgtggaatttatactg
gaaaatttcaccgagatgaataaactttgggtgcgaatgcagcttgagggacctggtaga
gttagagagaagcgggaaaaagaaaggagcgcacttcaagaacttgtaggaaaaaatctc
catgttctcagtcagatagaaggggtggaccttgagatttacaaagaaacagttcttcca
agagtcttagagcaggttgtcaattgcaaagatgatctttcccaatattatttgatggat
tgcataattcaggtgttccctgatgagtatcacttgcagactcttgagatgttattggca
gcttgcccccaggtccagccaacagttgacatcaagacagttttgtctcgactaatggac
agactgtcaaagtatgctgcttcaagtgctgatgtattaactgaatttctacaagttgaa
gccttcactaaattgagcaatgcaattgagaaggtcatagaagtgcaggtagacatgcct
gctgttggagctataactttgtatgtctctcttcttacctttactcttcgtgttcatcct
gatcggcttgattatgtggatcaagtactgggagcctgtgttaagaagctgtctagcata
ccaaaacttgaagatagccgggcaacaaaacaagtggttgctcttttgagtgctccattg
gagaaatacaatgatacagtaacagccttgaaaatttctaattatccacgagtaatggac
catcttgataatggaacaaataaagtcatggcaatggttatcattgaaagcattatgaag
aataatacatgcatatcaactgcggacaaggttgaggtgttgtttgaattaataaaggga
ctcattaaggacctggatggtgctacggatgagcttgatgaagaggatttcaaagatgag
caaaattctgttgctaagctaattcacatgctatataataatgaaccggaggaaatgttg
aagattatatgtattgtttggaagcataccatggctgggggaccaaaacgcctacccttt
acagttccttcacttgttttttctgcacttcggttggttaggcaactgcaaggtcaggag
ggagacatagtgggagaagaagtgccagcaacaccaaagaaaattttccagctcttgagt
cagatgatcgaagcactttcagctgttccatcacctgaacttgctttaaggttgtaccta
caatgtgctgaggcagctaatggctgtgatcttgagtatgttgcttatgaatttttcact
caagtgtttgtattgtacgaagaagaaattgcgaactccaaagcccaagtgactgcaatt
catctgataattggggctctccagaggatgaatgtctttagtgtcgagaaccgagatact
ttgacacacaagaccacaggatattcagctcgactattgaagaagcccgaccagtgcaga
gctgtttacgcatgttcacatcttttttgggttgatggtcaggacggcattagggatggg
gagagggtcctgctgtgcctaaagcgagcattgaggatcgcaaatgctgctcaacaaatg
gctagtattgcacgagatagcagtgggccagtcacgctctttgttgagatattgaacaag
tacctctattactttgaaaaaggaaataaacaaatcaccgctgctgcgatccaacacctg
atagaattaatcaatacagagatgcagggtgattctgcaacctcagatgcttttcttgcc
agtaccttgcgttacattcaattccagaaacaaagaggaggtgtaatgggtgccaaattt
gaatccattaaattgtaa
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