Gossypium raimondii: 105769313 Help Entry 105769313         CDS       T04129                                  Name (RefSeq) dicer-like protein 4 isoform X1   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism gra  Gossypium raimondii Brite KEGG Orthology (KO) [BR:gra00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:gra03036]     105769313 Chromosome and associated proteins [BR:gra03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     105769313    microRNA pathway     RISC loading complex      105769313 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer Helicase_C DEAD ResIII DND1_DSRM dsrm PAZ Cas3-like_C_2 RPW8 Motif Other DBs NCBI-GeneID:  105769313 NCBI-ProteinID:  XP_012445312 LinkDB All DBs Position 5:3908864..3922390 Genome browser AA seq 1655 aa AA seqDB search MPGGELSTDGTEPFMASKVKAFSTPSPIVEISRKDEPIMEKKEKDPRKIARKYQLELCKK AMEENIIVYLETGCGKTHIAVLLIYELGHLIRKPQNRVCIFLAPTVALVQQQARVIEDSL DFKVGTYCGNCRHLKNHHDWEIEIKEYEVLVMTPQILLRSLYHCFIRMDLIALLIFDECH HAQIKSNHPYAEIMKVFYDKATASMLPRIFGMTASPVVGKDASSQVNLPKSINSLENLLD AKVYSVGDKEELESFVASPVVRVYDYGPVNFGSSCSTIIYCSKLEEIKRQCIPFVRKNGD IQSARNTKKLLNRMHDNIIFCLENLGIWGALQACRLLLTGNNSERNELIEDEGILSDDSV CDRYLVHAADVFASDCTRDGSANDLSDVEILKEPFFSKKLLRLVGILSTFRLQPNMKCII FVNRIVTARSLSYILQNLKFLLFWKCHFLVGVHSGLKSMSRKTMKNILEKFRTGELNLLI ATKVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPLSEYAFLVNSGNEKELDLIKN FKKDEDRMNVEISFRTSTEVSIGLEERIYMVDSSGASISSGYSISLLHHYCSKLPHDEYF FPKPSFYYFEDSGGTICNIILPSNAPINQIASTPQSSVNAAKKDACLKAIEELHKLGALT DHLLPLQNSVLEEETLLVSSDSGSSEADEDSRGELHEMLVPAVLKESWTNLENCVLLYAY YIKFNPNPKDRSYKEFALFVKSPLPKEAERMELDLHLSRRRSVMTKLTPSGVAEFKREEI MQAQHFQEMFFKVILDRSELLSEFITLGNVFLSSSSSTFYLLLPVILSNCENKVTVDWGI VQRCLSSPLFKPPVAAAKIENFPSDVCLHLVNGCRSIRDIENSLVYATHKRAFYFITSIV GEKNGYSPYRDSGTLNHVEHLNMSGIHLKYPEQPLLHAKPLFKLHNLLHNRKPEDSEANE LEEYFIDLPPELCQLKIIGFSKEIGSSLSLLPSIMHRLENLLVAIELKHVFSASFAEGAE VTALRVLEALTTEKCQERFSLERLETLGDSFLKFAVARHLFLLHDALDEGELTRRRSNVV NNSNLFKLATRRNLQVYIRDQPFDPYQFFPLGHPCPVICTKETKGTVHPQSSCQVDHTKS EVKCSRNHHWLHKDTISDVVEALVGAFIVDRGFQAATAFLRWIGIRVDFQGSQLNSICAA SKRFMPLSSLLDIGDLENLLGYQFLHKGLLLQAIVHPSFNRHGGGCYQRLEFLGDAVLDY LITSYLFSLYPKLKPGQLTDLRSVSVNNKSFANVAVDRRLHKFLMCDSCHLNEAIEKYVD FITSSSPDRGLFEGPKCPKALGDLVESCFGAILLDTGFNLNRVWKIMLSILDPIKSLSSV QLNPIREVQELSQCYNWDLQFLVAKVGRNFSVDAKVNAGDVPLCVSYSNINRKEAIRTTA HQLYVKLKALGYAPKSKSLEEVLKGSPKNEAKLIGYDETPIDVSVTDIVGFENMKLQESL VNDFNPKTRSIKRTTSSGVSCISPGSRPPPSFEVKAARGSASGIEAKGKPPNCSIVDPSC GIDSPSKGESHGRTARSQLYEICAINCWKPPLFECCKEEGPSHLRSFTYRVIVEIEEAPD MILECFSSPRTTKKAAAEHAAEGALWYLKHGGYLQ NT seq 4968 nt NT seq  +upstreamnt  +downstreamnt atgccgggcggcgaattgtccaccgacgggaccgagccgttcatggcctctaaagttaaa gccttttctactccgtcgccgatcgttgaaatcagccgaaaagatgaacctataatggaa aagaaagagaaggatccacgaaaaattgctagaaagtatcaactggagttatgcaagaaa gccatggaagagaacataattgtttatttggagactggttgtgggaagacccacatcgca gttctgcttatttatgagcttggccatttgatacggaaacctcagaatagggtatgcatt tttcttgctcccacagtggctcttgttcagcagcaagcccgggttatagaagattctctt gatttcaaggttgggacttattgtggtaactgcagacacttgaagaaccatcatgactgg gaaatagagatcaaagaatatgaggttcttgttatgactccccaaatactacttcgtagc ttatatcactgcttcatcaggatggacttaatcgctcttctgatatttgatgagtgtcat catgctcaaataaaaagcaaccatccttatgcagaaatcatgaaagttttttatgataaa gctactgcatcaatgcttcctcgtatatttggaatgacagcatctcccgttgttggtaaa gatgcttccagtcaagtaaatttacctaaaagcatcaacagcctcgaaaacttgcttgat gctaaggtatattcagttggagataaggaggaattggaaagctttgtagcatctcctgtg gttagagtatatgattatggtcctgtcaattttggttcttcttgttccaccattatctat tgtagtaaacttgaggagattaagcgccagtgcataccttttgtcaggaagaatggtgat attcaatctgccaggaacacaaaaaagctgctcaacagaatgcatgataatataatcttt tgcttggaaaatttgggcatttggggagcattgcaagcttgccgacttcttttaactggt aataactctgagaggaatgaattgatagaagatgaagggattttaagtgacgactctgta tgtgatcgatatcttgttcatgctgctgatgtttttgcttcagattgtacgagagatgga tctgcaaacgatttatctgatgtagagattttgaaggaaccatttttctcgaaaaagctg ctacgtcttgttggaattctttccaccttcaggttacagccaaatatgaaatgcataatt tttgtgaataggattgttactgcaagatccttgtcatacatactgcaaaaccttaagttc ctattattttggaagtgccattttcttgtgggagtccactctggacttaaaagtatgtca agaaagacaatgaaaaacattcttgagaagttcagaacaggagagttgaatcttttgatt gcaactaaagtcggtgaagaaggacttgacattcagacatgctgccttgtgatacgtttt gaccttccagaaactgttgcgagctttatccaatcaagaggacgtgcaagaatgcctctc tctgagtatgcatttctggtgaacagtgggaacgagaaggaactagatttgattaaaaat tttaagaaagatgaagatcgtatgaatgtggaaatttctttcagaacatctactgaggtt tctattggtcttgaggagagaatctatatggttgattcatctggtgcttccatcagttca ggatatagtatctctctacttcatcattactgctcaaaactgccccatgatgagtacttt ttccccaagccaagcttttattattttgaagattcaggaggaacaatctgcaatataata ttaccttcgaatgctccaataaatcaaattgccagtacacctcaatcttcagttaatgct gccaaaaaagatgcttgtctaaaagcaattgaagaattgcataaattgggagccttgact gaccatctcttgccactgcaaaacagtgttcttgaggaggaaacattgctggtgtcttct gattctgggagctctgaagcagatgaggattcacgaggtgaactacatgagatgcttgtt cctgctgtgcttaaagaatcatggactaacttagagaactgtgtcctcctttatgcttac tatataaaatttaatccgaatcctaaggacaggagctataaagagtttgctctctttgtc aagtctcctctccctaaggaggctgagagaatggagctggatcttcacctatctcggcgt aggtcggtgatgacaaagcttaccccatctggagttgcagaatttaagagagaagagatc atgcaggcacagcattttcaagaaatgttcttcaaggtcatccttgatagatcagaactc ctttctgaatttattactttaggaaatgtctttctttcatcaagctcctcaacattctat ttattgcttcctgttattctctccaattgtgagaataaagtgacagtggattgggggatt gtccaaagatgtttgtcgtctccactttttaagcctcctgttgcagctgcaaagattgaa aatttcccttcagatgtttgcttgcaccttgtaaatggttgtaggagtataagagacatt gagaatagtttggtgtatgccacacacaagagggccttttactttattactagcattgtt ggtgaaaaaaatggttacagcccatatagagattcaggcactttaaatcacgtggagcac ttaaacatgtctggcattcatcttaagtaccctgaacaacctcttctgcatgcaaaacca ctttttaagttgcacaatttgctccacaaccgaaagccggaggattcagaagcaaatgaa ctggaagaatacttcattgatttgcctcctgagctttgtcagctgaaaataataggcttc tccaaagagatagggagttcgctttctttgttaccatcaattatgcatcgcctggagaac ttgcttgtggctattgaactgaagcatgttttttctgcttcatttgccgagggagctgaa gttactgcccttagggtcctagaagcacttactacagagaagtgtcaagagcgtttttct cttgaaaggcttgagacacttggtgattccttcctcaagtttgctgtggcccgccatctt tttcttttacatgatgcacttgatgaaggggaattgactaggagaaggtctaatgttgta aataattctaatttattcaagctggcaacaaggcgaaatttacaggtttacatacgtgat caaccttttgatccttatcagttctttcccttgggccatccctgcccagtaatttgtaca aaagaaactaaaggaactgttcacccacaatctagttgtcaagtagatcatacaaagagt gaagtcaaatgtagtagaaatcaccattggctacataaggacacaatttctgatgtggtt gaggctcttgtaggagcatttatagttgataggggcttccaagcggcaacagcatttctt agatggataggcatacgagtggacttccaaggttctcaacttaatagtatttgcgctgca agcaagagatttatgccactttcctccctattggatattggagatcttgaaaatttgttg ggttaccagtttcttcataagggtctcctccttcaggcgattgtgcatccttcttttaat aggcatgggggaggctgctaccagagattggagtttcttggagatgctgtcttagattat ttaattacatcatatctgttttcactgtatccaaagttgaaacctggtcagttgactgat ttgagatcagtgtcagtgaacaacaagtcctttgccaatgttgcagtggacagacgctta cacaaatttcttatgtgtgactcttgtcacctcaacgaggccatagaaaaatatgttgac ttcatcacatcatcatcaccagacaggggattgtttgaagggccaaaatgtccgaaggct cttggtgacttggtagagtcttgtttcggtgctattctccttgatacagggttcaacttg aaccgtgtttggaagataatgctatccattctggatccaatcaagagcctttcaagtgtg cagctcaatcctatcagggaagtacaggagctttcccagtgttataactgggatttgcag tttctagttgcaaaagttggtagaaatttttcagtggatgcaaaggtaaatgcaggagat gtacctctatgtgtttcttacagcaacattaatagaaaagaagctatcagaactactgca catcaactatatgtaaagttaaaggctctaggatatgcacccaaatcaaagtccttggaa gaagttttgaagggaagccccaagaatgaagccaagctgattggatacgatgaaacaccc attgatgtcagtgttactgacatagttggatttgaaaacatgaaattgcaagaatctctt gtgaatgatttcaaccccaaaactcgttctattaaaaggacaacttctagcggtgtatct tgcatctcacctggtagcagacctccaccttcttttgaagtaaaagcagcaaggggttca gcctctggtattgaagccaaaggcaaaccccccaattgctccattgtggatcctagttgt gggattgactcgccatccaaaggtgaatcacatggtcgtactgctagatcacagttatac gaaatctgtgctatcaattgctggaaaccccctttgtttgaatgttgcaaagaggaagga ccaagtcatttgagatcattcacttacagggtaatagttgaaatcgaagaagctccagat atgatattggagtgcttcagcagtcctcggaccacaaagaaggcagcagccgagcatgca gcggaaggtgcactctggtatttaaaacatggaggatacttacaatag

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