Gossypium raimondii: 105769428
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Entry
105769428 CDS
T04129
Name
(RefSeq) farnesyl pyrophosphate synthase 1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
gra
Gossypium raimondii
Pathway
gra00900
Terpenoid backbone biosynthesis
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Module
gra_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
105769428
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gra01006
]
105769428
Enzymes [BR:
gra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
105769428
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
105769428
Prenyltransferases [BR:
gra01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
105769428
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Zein-binding
XrtH_assoc
Motif
Other DBs
NCBI-GeneID:
105769428
NCBI-ProteinID:
XP_012445510
UniProt:
A0A0D2S3N8
LinkDB
All DBs
Position
5:14330857..14335491
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AA seq
342 aa
AA seq
DB search
MADLKSAFLNVYSQLKSELLQDPSFEFTDDSRQWVERMLDYNVPGGKLNRGLSVIDSYRL
LKDGKKLTQDEIFLTSALGWCIEWLQAYFLVLDDIMDSSHTRRGQPCWFRLPKVGMIAVN
DGVILRNHITRILKNHFRGKPYYVDLLDLFNEVEFQTASGQMIDLITTLEGEKDLSKYSL
QQHRRIVQYKTAYYSFYLPVACALVMAGENLDNHIDVKNILVDMGIYFQVQDDYLDCFGN
PETIGKIGTDIEDFKCSWLVVKALEICNEEQKKVLYENYGKPDPANVAKVKALYNELNLK
GVFEDYESKSYERLVTSIEAHPSKPVQAVLKSFLGKIYKRQK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctcaagtcagcatttctcaatgtgtattcccagctcaaatcggagctcctt
caggatccttctttcgagtttactgatgattctcgtcaatgggttgaacggatgctggac
tacaatgtgcctggagggaaactgaatcgaggactttctgtgattgatagctaccgcctg
ttgaaagatggaaagaaattgacccaagatgagatttttcttacaagtgcgctcggttgg
tgtattgaatggcttcaggcatattttcttgttcttgatgacatcatggacagctctcac
acccggcgtggccagccttgttggtttagattgccgaaggttggtatgattgctgtaaat
gatggtgttatacttcgcaatcacatcaccaggattctcaaaaatcactttcgtgggaaa
ccttactatgtggatctgctagatttatttaatgaggtggagtttcaaacagcttcagga
cagatgatagatctgattacaacacttgaaggagaaaaggatctatccaaatactcattg
caacagcaccgtcgcattgttcagtacaagactgcctattattcattttatcttcctgtt
gcgtgtgcactggttatggctggtgaaaatcttgacaaccacatcgatgtaaagaacatt
cttgttgacatgggaatctactttcaagtacaggatgactatttggattgctttggcaat
cctgagaccattggtaagattggaaccgatattgaagattttaagtgctcttggttggtg
gttaaagctttggaaatctgtaatgaggagcagaagaaagtgttatatgagaactatggg
aaaccagaccctgccaatgttgctaaagtgaaggctctatacaatgagcttaatctcaag
ggcgtatttgaggactacgaaagcaagagctatgagaggctcgtaacctcaattgaagct
catcctagcaaaccagtgcaagctgtgttgaagtcattcttagggaagatctacaagagg
cagaaatag
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